Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0733 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAAACAACATCAGAAAGAGCTATTTTTTGCAGCTCATCACACAACAAGACAACACCAATGCATACAAGCAAATCATGATGCCACAGAAGAAACAAGCTCACAGCAACAAAATCAATATTCCCTGAAATTGGCTCTTTCTTCCACTTCCCAAAATACTATGCTACATGCTTTTGTTGCTTTGCTGCTACTTGTTACTTCAATTGGCACAGCATTCTCTCACCCCACCATTGCCTCCAATTCTTCTTCAACTTTGCCAGCAGCACTCTCTCACTTCCATGCTAATAACAACACATTGAGACCTTCTGCAGTGTTGCAAAAGTTGAGGAGAATCAGAGCTCATCTCAACAAGAGCAACAAGCCTGCTGTTAAAACAATTAAGAGTCCAGATGGGGATTTGATTGATTGTGTTTTGTCTCATCAGCAACCTGCTTTTGACCATCCTCAACTCAAAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGTCACACTCACACCAATGGAGAAACAGTCATAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAGCATGCCCAGAAGGAACTGTTCCAATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCCGTTAGAAGATTTGGAAGAAAACCAAGAAATGTACGGAGGGACTCCACAGGCACTGGTCATGAGCATGCAGTTGTTTCTGTAAATGGAGATCAATACTATGGAGCAAAAGCAAGCATAAACGTGTGGACGCCTAGCGTAACCGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCGTTTGGTAATGATCTGAATACCATAGAAGCTGGATGGCAGGTAAGTCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACAGGATGCTACAACTTACTATGTTCAGGATTTGTCCAAACCAACAACAGGATAGCAATAGGGGCTGCAATCTCACCAAGATCCATCTACAATGGCAGACAATTTGATATTGGATTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAGTTTGGGTCGGGGCTTCTAGTTGGGTACTGGCCAGCATACTTGTTTAGTCACTTGAGAAACCATGCAAGCATGGTGCAATTTGGAGGGGAAATTGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTTCAGGAGAAGGGTTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTTGTTGATTGGGACAATAACTTGCTTCCTCTATCAAATATTCACCAGTTGGCTGACCATTCCAATTGCTATGACATAAGGATGGGATCAAACAGTGTTTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGGAATGTGAGATGCCCATGA 1458 0.4287 MDMKGYSVSWTKQHQKELFFAAHHTTRQHQCIQANHDATEETSSQQQNQYSLKLALSSTSQNTMLHAFVALLLLVTSIGTAFSHPTIASNSSSTLPAALSHFHANNNTLRPSAVLQKLRRIRAHLNKSNKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGHTHTNGETVIESFQLWTDSGEACPEGTVPIRRTTEQDFLRASSVRRFGRKPRNVRRDSTGTGHEHAVVSVNGDQYYGAKASINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSRSRGYHTGTQMGSGHFSGEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRMGSNSVWGTYFYYGGPGRNVRCP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0733 485 Pfam Neprosin 268 478 IPR004314 -
Gso17g0733 485 Pfam Neprosin activation peptide 135 242 IPR025521 -
Gso17g0733 485 PANTHER CARBOXYL-TERMINAL PEPTIDASE 49 485 - -
Gso17g0733 485 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 49 485 - -
Gso17g0733 485 Gene3D - 262 372 - -
Gso17g0733 485 MobiDBLite consensus disorder prediction 154 178 - -
Gso17g0733 485 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0733 Gso-Chr17 6759733 6763698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0733 - - gmx:100820129 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0334 5 3474166 3478033 Gso17g0733 17 6759733 6763698 GST
Gso17g0733 17 6759733 6763698 Gso4g1564 4 45144037 45149822 PCT
Gso17g0733 17 6759733 6763698 Gso6g1516 6 15366175 15372094 PCT
Gso4g1564 4 45144037 45149822 Gso17g0733 17 6759733 6763698 PCT
Gso6g1516 6 15366175 15372094 Gso17g0733 17 6759733 6763698 PCT