Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0334 ATGGACATGAAGAAGGGATATTCAGTTTCCTTGACAAAACAACAACATAAGAAAGAGCCATTTTTTGCAGTTCATCACACAAGAAAACAACACCAATGCATCCAAGCAAATCATGATGCCACAGAAGAAACAAGCTCACAGCAAAATCAATATTCCCTCAAATTGGCTCTTTCTTCCACTTCCCAAAATACTACTCTACTACTGCCTGCTTTTGTTACTTTGCTGCTACTTGTTACCTCAATTGGCACAGCATTCTCTCACCCCACCATTGTCTCCAATTCTTCTTCACCTTTGCCACCAGCACTCTCTCACTCCAATGCTAATAACCAAACTTTGAGACCTGCTGCAGTGCTGCAAAAGTTGAGGAGAATCAGAACTCATCTCGACAAGATCAACAAGCCTGCTGTTAAAACAATCAAGAGTCCAGATGGGGATTTGATTGATTGTGTTTTGTCTCATCAGCAACCTGCGTTTGATCATCCTCAGCTCAAAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGACACACCAATGGAGAAACAGTCGTAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAGCATGCCCTGAAGGAACTGTTCCAATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCTGTTAGAAGATTTGGAAGAAAACCAAGAAATGTACGGAGGGACTCAACAGGCATTGGTCATGAGCATGCAGTTGTTTCTGTAAATGGAGATCAATACTTTGGAGCAAAAGCAAGCATAAACGTGTGGACGCCTAGCGTAACTGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCGTTTGGTAATGATCTAAATACCATAGAAGCTGGATGGCAGGTAAGCCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACAGGATGCTACAACTTACTATGTTCAGGATTTGTCCAAACCAACAACAGAATAGCAATAGGGGCTGCAATCTCACCAAGATCCATCTATAATGGCAGACAATTTGATATTGGATTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAGTTTGGGTCGGGGCTACTAGTTGGGTACTGGCCAGCATACTTGTTCAGTCACTTGAGAAACCATGCAAGCATGGTGCAATTTGGAGGGGAAATTGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTGCTGGAGAAGGGTTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTTGTTGATTGGGACAATAATTTGCTTCCTCTATCAAATATTCACCAGTTGGCTGACCATTCCAATTGCTATGACATAAGGGTGGGATCAAACAATGTTTGGGGAACTTACTTTTATTATGGAGGTCCGGGAAGGAATGTGAGATGTCCATGA 1461 0.4271 MDMKKGYSVSLTKQQHKKEPFFAVHHTRKQHQCIQANHDATEETSSQQNQYSLKLALSSTSQNTTLLLPAFVTLLLLVTSIGTAFSHPTIVSNSSSPLPPALSHSNANNQTLRPAAVLQKLRRIRTHLDKINKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGHTNGETVVESFQLWTDSGEACPEGTVPIRRTTEQDFLRASSVRRFGRKPRNVRRDSTGIGHEHAVVSVNGDQYFGAKASINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAGEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRVGSNNVWGTYFYYGGPGRNVRCP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0334 486 Pfam Neprosin activation peptide 138 243 IPR025521 -
Gso5g0334 486 PANTHER CARBOXYL-TERMINAL PEPTIDASE 46 486 - -
Gso5g0334 486 MobiDBLite consensus disorder prediction 157 179 - -
Gso5g0334 486 Pfam Neprosin 269 479 IPR004314 -
Gso5g0334 486 Gene3D - 263 373 - -
Gso5g0334 486 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 46 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0334 Gso-Chr5 3474166 3478033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0334 - - gmx:100782442 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0334 5 3474166 3478033 Gso17g0733 17 6759733 6763698 GST
Gso5g0334 5 3474166 3478033 Gso4g1564 4 45144037 45149822 PCT
Gso5g0334 5 3474166 3478033 Gso6g1516 6 15366175 15372094 PCT
Gso4g1564 4 45144037 45149822 Gso5g0334 5 3474166 3478033 PCT
Gso6g1516 6 15366175 15372094 Gso5g0334 5 3474166 3478033 PCT