Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1564 ATGGCCAATGATCCATTTTTTGAAGCTCACCACAGAACAAGACAACAACAACACCAATGCATGATGATGATACAACAACCAAACAATGATGATGATGTTGTCCCAGAACACACATGTGCACAACAACAACAACAAGAGCAACAAAACCAATCTCCAAAATTGGCTGCTTCTTCCACTTCCCAAAATGCTACACCTGTGCTACCTGCTTTTGTTGCCTTGCTGCTCCTTGTTACTTCAATTGCCCCAGCAGCACTCTGCCACCCTTTGCAAGGTAGTAACCACACTTTTAGGCCAAATCATGAGTTGCTCAAGTTGAGGAGAGTCAGAGCACACTTGAAGAAAATCAACAAGCCTTCTGTCAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCACCAACAACATGCTTTTGACCATCCTAAGCTTAGAGGCCACATAGTATTGGATCCACCAGAGAGGCCAAAGGGGAACCACACCAATGGTGAAGCTGAAAGGGTAATTGAGAGCTTTCAGCTGTGGAGTGATTCTGGTGAAGCATGCCCAGAAGGAACTGTTCCAATCAGAAGAACTACAGAAGAGGATATTCTCAGAGCAAGTTCTATCCAAAGATTTGGAAGAAAACCAAGACCTGTACGGAGAGACTCTACTGGCAGTGGTCACGAGCATGCAGTAGTTTTTGTAAATGGGGATCAATATTATGGAGCAAAAGCTAGCATAAACGTGTGGGCACCCCGTGTAACTGATGAATTTGAATTCAGTTTGTCACAAATGTGGGTTATTGCTGGCTCCTTTGGTAAAGATCTCAACACCATAGAAGCTGGTTGGCAGGTAAGTCCACAACTATATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACTACTGATGCATATCAAACAACTGGGTGCTACAACTTACTCTGTTCAGGCTTTATCCAAATCAACAATAGGATAGCAATAGGTGCAGCAATTTCGCCAAGATCCGCTTTCAACAGAAGACAATTTGATATTGGCTTAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGCTGGAATTCGGGTCAGGACTACTAGTTGGGTACTGGCCAGCAAACATGTTCAGTCACTTGAGGAACCATGCGAGCATGGTGCAATTTGGAGGAGAAATTGTGAACACTCGTTCAAGGGGTTACCACACTGACACCCAAATGGGGAGTGGCCATTTTGCTGAAGAAGGGTTTAGAAAATCAGCATATTTTAGAAACTTACAAGTGGTTGATTGGGACAATAGCTTGCTTCCTCTTAGAAATATTCACCTTTTGGCTGATCATTCCAACTGCTATAACATATGGCAGGGAACCAACAATGTTTGGGGGACTTACTTTTACTATGGAGGGCCTGGAAGGAATGTGAGATGCCCTTGA 1422 0.4339 MANDPFFEAHHRTRQQQHQCMMMIQQPNNDDDVVPEHTCAQQQQQEQQNQSPKLAASSTSQNATPVLPAFVALLLLVTSIAPAALCHPLQGSNHTFRPNHELLKLRRVRAHLKKINKPSVKTIQSPDGDLIDCVLSHQQHAFDHPKLRGHIVLDPPERPKGNHTNGEAERVIESFQLWSDSGEACPEGTVPIRRTTEEDILRASSIQRFGRKPRPVRRDSTGSGHEHAVVFVNGDQYYGAKASINVWAPRVTDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQINNRIAIGAAISPRSAFNRRQFDIGLMIWKDPKHGHWWLEFGSGLLVGYWPANMFSHLRNHASMVQFGGEIVNTRSRGYHTDTQMGSGHFAEEGFRKSAYFRNLQVVDWDNSLLPLRNIHLLADHSNCYNIWQGTNNVWGTYFYYGGPGRNVRCP* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1564 473 Pfam Neprosin 256 466 IPR004314 -
Gso4g1564 473 MobiDBLite consensus disorder prediction 28 59 - -
Gso4g1564 473 Gene3D - 247 359 - -
Gso4g1564 473 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 45 473 - -
Gso4g1564 473 Pfam Neprosin activation peptide 122 230 IPR025521 -
Gso4g1564 473 PANTHER CARBOXYL-TERMINAL PEPTIDASE 45 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1564 Gso-Chr4 45144037 45149822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1564 - - gmx:100803280 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1564 4 45144037 45149822 Gso6g1516 6 15366175 15372094 GST
Gso5g0334 5 3474166 3478033 Gso4g1564 4 45144037 45149822 PCT
Gso17g0733 17 6759733 6763698 Gso4g1564 4 45144037 45149822 PCT
Gso4g1564 4 45144037 45149822 Gso5g0334 5 3474166 3478033 PCT
Gso4g1564 4 45144037 45149822 Gso17g0733 17 6759733 6763698 PCT