Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1510 ATGTTCTCTTTGAGGCACTTCTTTGTACTCTCTCTCGCCTTGAACGTCAGCCTCATACTCAGATTAATGATGCACCAAGCTCAACAAAAACCTCATCACAATCATTCTGTAACTCATCACGAGGAGCATAACAATAACATCCATAAATCACGCATGCTTATATCATCATCATCATCTACTTCGTCTTTCGCCAATTCTACTTCCACAACAGGAGCTAGCAGCAATAATAGAGTGATCAACCTCGACCATGGAGACCCGACAGCGTATGAGAGGTTTTGGCGACAAACGGGTGACAAGAGCACGATCACAATCCCTGGATGGCAGTCTCTGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGCGAGGGAAGTGGTGAGGCTGCACAATGTGGTTGGAAATGCAGTCACGGAAGGGCGTCACATTGTGGTTGGAACAGGTTCTTCTCAGCTATTTCTTGCTGCTCTTTATGCTCTCTCCCCAATTGATTCACCTGAACCAATCAGTGTTGTATGTGCCTCACCCTACTACTCGTCGTACCCATCAATGACGAATCACTTGAAATCAGGGCTTTACAAATGGGGTGGTGATGCAGAAAGTTATGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGACACGTAAGAAGATCTAAGGTCAACAGAAGCCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACTCCAATATCAGCGCCTGCAGATCATGATCTCACGCTTTTCACCGTCTCAAAAAGCACTGGCCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACCAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTGAATACAATTGGAGTGTCTAAGGATTCTCAACTCAGGGCTGCTAAGGTCTTAAGGGCAGTTTCTGATAGCTGGGAACAAGGAAACTCCAAAGAGAGCGAGTCATTCTTCAAATTCAGCCACAAACTCATGGCCAACAGGTGGAAGCAATTGAGACTAGTTGTGGAGCGCAGCGAGTTGTTCAGTTTGCCCAAATTTTCTCCAGCATTCTGCACCTTTTTCAATCAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTGGAAGACTGCGAAAGCTTCCTTCGAGGATACAACATCTTAACGAGAAGTGGAATACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGACGAAAATTTTAACCAGTTTCTGGATAGACTCTCTGCCATACAGTCGTGA 1320 0.4508 MFSLRHFFVLSLALNVSLILRLMMHQAQQKPHHNHSVTHHEEHNNNIHKSRMLISSSSSTSSFANSTSTTGASSNNRVINLDHGDPTAYERFWRQTGDKSTITIPGWQSLSYFSDVTNICWFLEAEFAREVVRLHNVVGNAVTEGRHIVVGTGSSQLFLAALYALSPIDSPEPISVVCASPYYSSYPSMTNHLKSGLYKWGGDAESYEKEGPYIELVTSPNNPDGHVRRSKVNRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNSKESESFFKFSHKLMANRWKQLRLVVERSELFSLPKFSPAFCTFFNQVLEPQPAFVWLKCEGNVEDCESFLRGYNILTRSGIHFGVSPKYVRISMLDTDENFNQFLDRLSAIQS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1510 439 MobiDBLite consensus disorder prediction 58 79 - -
Gso6g1510 439 Gene3D Aspartate Aminotransferase, domain 1 323 439 IPR015422 GO:0003824
Gso6g1510 439 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 438 - -
Gso6g1510 439 CDD AAT_like 126 434 - -
Gso6g1510 439 Pfam Allinase 79 437 IPR006948 GO:0016846
Gso6g1510 439 SUPERFAMILY PLP-dependent transferases 76 436 IPR015424 -
Gso6g1510 439 Gene3D - 43 119 IPR037029 GO:0016846
Gso6g1510 439 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 438 - -
Gso6g1510 439 Gene3D - 123 322 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1510 Gso-Chr6 15283391 15292145 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1510 K16903 - gmx:100820582 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1510 6 15283391 15292145 Gso6g1510 6 15283391 15292145 ECH
Gso4g1571 4 45228794 45243363 Gso6g1510 6 15283391 15292145 GST
Gso5g0340 5 3554771 3561912 Gso6g1510 6 15283391 15292145 PCT
Gso17g0728 17 6686699 6693549 Gso6g1510 6 15283391 15292145 PCT
Gso6g1510 6 15283391 15292145 Gso5g0340 5 3554771 3561912 PCT
Gso6g1510 6 15283391 15292145 Gso17g0728 17 6686699 6693549 PCT