Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0728 ATGGCAAAGCTTGCAGTTCCACCTTTGCTTTCTCTAAGGCACTTGCTGGTGCTATCACTTGCTTTGAATGTGAGTTTGATTCTGAGGACTGTGTATTATGAGAGTGAAAAAGGAAGCAAAGGGTTTTGTTTGAACAAAAACATGATGGCGGATGCAGATTCTGATGATAGAGAGGGGCATCTTATCCACAAATCACGTTTGGCTATGTCCTCTACTTCGTCTCTCGTTAATTCTACTCGTGCAGATCATCCAGGAGGAAGGGAAACAGTGATCAACTTGGATCATGGAGACCCAACCATATATGAAAGATTTTGGAGACAAGTGGGTGACAAGACCACAATCATAATTCCAGGATGGCAATCCTTGAGTTATTTTTCTGATGGCTCAAACATTTGCTGGTTTTTAGAGACCGAGTTTGCAAGGGAAGTAGTGAGGTTACATAAAGTGGTGGGGAATGCTGTGACAGAAGGTCGCCATATTGTTGTTGGGACAGGTTCCTCTCAGCTAATTCTGGCTGCCCTTTATGCCCTGTCCTCGCCTGATGCTGCTGAACCAATCAGTGTGGTATCTGCCGCACCCTATTATTCGTCCTACCCATCAATGGCAGATTATCAGAAATCAGGCCTTTACAAATGGGCTGGTGATGCAGAGAATTTTGACAAAGAGGGTCCTTATATTGAGCTTGTTACTTCTCCCAATAACCCTGATGGACATAGAAGGGAAGCTATGGTCAACCGAAGCCAAGGACTATTGATTCATGACCTTGCCTATTATTGGCCTCAATACACTCCAATATCATCCCCTTCAGATCATGATCTCACTCTTTTCACTGTCTCAAAATCCACTGGTCATGCAGGAATGCGCATAGGGTGGGCTCTTGTCAAAGATAAAGGGGTAGCAAAGAAAATGACTAAATTCATAGAGATAAGTACAATCGGTGTCTCGAAGGATTCTCAACTCAGAGCTGCCAAAGTTTTAAAGGCAGTGTCTGACAGCTGCGAACATGAAAACTCCCAATATGAGGAATCATTTTTCATGTACAGCTACAACATAATGTCACAAAGATGGAAGCAACTGAGAGCAGTAGTTGAGGCCGGTGATTTGTTCACTTTGCCACAATTTTCTCCTGCATTCTGCACCTTCTTTGGTCAGGAGACGGAGCCTCAACCAGCTTTCATATGGCTGAAGTGTGAGGGAGATATAGAGGACTGCGAAAGCTTGCTTCGAGAACACAAAATTATATCAAGAAGTGGGAAACACTTTGGGGCTAGCCCAAAATACGTAAGAATTAGCATGCTGGATACTGATGAAACTTTTATACAGTTAATAGATAGACTATCAGCCATACAACAAGGAGAATAA 1362 0.431 MAKLAVPPLLSLRHLLVLSLALNVSLILRTVYYESEKGSKGFCLNKNMMADADSDDREGHLIHKSRLAMSSTSSLVNSTRADHPGGRETVINLDHGDPTIYERFWRQVGDKTTIIIPGWQSLSYFSDGSNICWFLETEFAREVVRLHKVVGNAVTEGRHIVVGTGSSQLILAALYALSSPDAAEPISVVSAAPYYSSYPSMADYQKSGLYKWAGDAENFDKEGPYIELVTSPNNPDGHRREAMVNRSQGLLIHDLAYYWPQYTPISSPSDHDLTLFTVSKSTGHAGMRIGWALVKDKGVAKKMTKFIEISTIGVSKDSQLRAAKVLKAVSDSCEHENSQYEESFFMYSYNIMSQRWKQLRAVVEAGDLFTLPQFSPAFCTFFGQETEPQPAFIWLKCEGDIEDCESLLREHKIISRSGKHFGASPKYVRISMLDTDETFIQLIDRLSAIQQGE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0728 453 Gene3D Aspartate Aminotransferase, domain 1 342 450 IPR015422 GO:0003824
Gso17g0728 453 Gene3D - 81 131 IPR037029 GO:0016846
Gso17g0728 453 CDD AAT_like 138 446 - -
Gso17g0728 453 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 452 - -
Gso17g0728 453 Gene3D - 135 339 IPR015421 GO:0003824
Gso17g0728 453 SUPERFAMILY PLP-dependent transferases 87 447 IPR015424 -
Gso17g0728 453 Pfam Allinase 91 449 IPR006948 GO:0016846
Gso17g0728 453 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0728 Gso-Chr17 6686699 6693549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0728 K16903 - gmx:100818522 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0340 5 3554771 3561912 Gso17g0728 17 6686699 6693549 GST
Gso17g0728 17 6686699 6693549 Gso4g1571 4 45228794 45243363 PCT
Gso17g0728 17 6686699 6693549 Gso6g1510 6 15283391 15292145 PCT
Gso4g1571 4 45228794 45243363 Gso17g0728 17 6686699 6693549 PCT
Gso6g1510 6 15283391 15292145 Gso17g0728 17 6686699 6693549 PCT