Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1571 ATGGCTAAGCTTCCTACCATGTTCTCTTTGAGGCACTTTCTGGTACTCTCCCTCGCCTTGAACGTCAGCCTCTTACTCAGATTAATGATGCACCAAGGTGCACAAAAAGCTCACAAAGAAAGAACCAATTCTGTAACTGAGGAGCACCACAATATCCATAAATCACGCATGGTTATATCATCATCATCATCATCGTCATCTACTTCGTCTTTCGCCAATTCTACTTCCACCACAGGAGGCTACAATAGAGTGATCAACCTCGACCATGGAGACCCGACAGCGTATGAGAGGTTTTGGCGACAAACGGGTGACAAGAGCACGATCACAATCCAGGGATGGCAGTCTATGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGCGAGGGAAGTGGTGAGGTTGCACAATGTGGTGGGAAATGCAGTCACAGAAGGGCGTCACATTGTTGTTGGAACAGGTTCTTCTCAGCTCTTTCTTGCTGCTCTTTATGCTCTCTCCCCAACTGATTCACCTGAACCAATCAGTGTCGTTTGTGCCACACCCTACTACTCGTCATATCCATCAATGACGGATCACTTGAAATCAGGGCTTTACAAATGGGGTGGTGATGCAGAAAGTTATGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGACACGTAAGAAGATCTAAGGTCAACAGAAGCCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACTCCAATATCAGCACCTGCAGATCACGATCTTACGCTTTTCACTGTCTCAAAAAGCACTGGCCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACCAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTCAATACAATTGGAGTGTCTAAGGATTCCCAACTCAGGGCTGCTAAGGTCTTAAGGGCAGTTTCTGATAGCTGGGAACTAGGAAACTCCAAAGAGAGCGAGTCATTCTTCAAATTCAGCCACAAACTCATGGCCAACAGGTGGAAGCAATTGAGACTAGTTGTGGAGAGTAGCGAGTTGTTCAGTTTGCCCAAATTTTCTCCAGCATTCTGCACCTTCTTCAATCAGGTCTTGGAGCCTCAACCAGCTTTTGTATGGTTAAAGTGTGAGGGGAACGTGGAAGACTGCGAAAGCTTCCTTCGAGGACACAACATCTTAACGAGAAGTGGAACACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGACGAAAATTTTAACCAGTTTCTAGATAGACTCTCTGCCATAATGTCGTGA 1338 0.4537 MAKLPTMFSLRHFLVLSLALNVSLLLRLMMHQGAQKAHKERTNSVTEEHHNIHKSRMVISSSSSSSSTSSFANSTSTTGGYNRVINLDHGDPTAYERFWRQTGDKSTITIQGWQSMSYFSDVTNICWFLEAEFAREVVRLHNVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTDSPEPISVVCATPYYSSYPSMTDHLKSGLYKWGGDAESYEKEGPYIELVTSPNNPDGHVRRSKVNRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWELGNSKESESFFKFSHKLMANRWKQLRLVVESSELFSLPKFSPAFCTFFNQVLEPQPAFVWLKCEGNVEDCESFLRGHNILTRSGTHFGVSPKYVRISMLDTDENFNQFLDRLSAIMS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1571 445 MobiDBLite consensus disorder prediction 37 55 - -
Gso4g1571 445 MobiDBLite consensus disorder prediction 56 77 - -
Gso4g1571 445 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 444 - -
Gso4g1571 445 Gene3D Aspartate Aminotransferase, domain 1 328 445 IPR015422 GO:0003824
Gso4g1571 445 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 444 - -
Gso4g1571 445 MobiDBLite consensus disorder prediction 37 77 - -
Gso4g1571 445 Pfam Allinase 85 443 IPR006948 GO:0016846
Gso4g1571 445 CDD AAT_like 132 440 - -
Gso4g1571 445 SUPERFAMILY PLP-dependent transferases 83 444 IPR015424 -
Gso4g1571 445 Gene3D - 32 125 IPR037029 GO:0016846
Gso4g1571 445 Gene3D - 129 327 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1571 Gso-Chr4 45228794 45243363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1571 K16903 - gmx:100807013 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1571 4 45228794 45243363 Gso6g1510 6 15283391 15292145 GST
Gso5g0340 5 3554771 3561912 Gso4g1571 4 45228794 45243363 PCT
Gso17g0728 17 6686699 6693549 Gso4g1571 4 45228794 45243363 PCT
Gso4g1571 4 45228794 45243363 Gso5g0340 5 3554771 3561912 PCT
Gso4g1571 4 45228794 45243363 Gso17g0728 17 6686699 6693549 PCT