Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0881 ATGGCAGAGAAAACCAAGAACAAGGTGGAGGTTCAATTGGGTTGCGGTTTGATGGGAAGAATTTTCCATCTCAAAACCAATAACAGGACTAGAAAATCCTCTGTTCATTCACTACCCGTGAAGGTTTGCAACAACACTGCACAGCAACAGAGGGATCAGGCCAAAAACGAAGCCAAACCCTCTCCAAACCATGAATCAAATGTTCCAAGAGATAGCTCCATTGGAACCATTCCTACACTGAAAGTGGAGCAGAATCCAGCGGGAAAGAGTAGCTCTAGTCACCGTGCACCTTCAGCATACCAAAACACTCAAAACGGGAGAGCCTCGGACGCTGCAAGAACCTCAATTCAACGAAGCCACGACTCAAATGAAGAGAGTAAACAACAACAGAAAGAGCACGCTGTTGTTAACTCTCTGGAACTTGCTAGGATAAGTACAAGTGCTAATCATCATCATCATCAAAACAACGAGACGAAATCCCTGGCGAAAGAATTTGTGTTACCAATCACTGGGAATTTGCTTGTGAATAGCAGCCCAAGAACTAGTATTACCAAGAGCAAAGAGTTGAACACCTTGTCCGGCTCCTGTTCTTACAACAGTAATAATAGTACTAACAAAGGCATGATGGGGAACATAATGAGGAAGAACAGCGACGAGCTTGCGCAATTTCGGAGTCCGAGGAACGGCAGAGTGGACCCTGAGGTGTTGAAGTCCATGGGGAATGAAGCGTACAAACAGGGGAGATTTGAAGAGGCTTTGGCTTTGTATGACCGAGCCATTGCTGTTGACTCAAAGAAAGCAACGTATCATTGCAATAAGAGCGCGGCTTTGATAGGTTTGGGAAGGTTTCTTCAGGCAATTGTTGAGTGTGAGGAAGCTATCAAGTTGGAGCCTTCGTATGGCAGAGCCCACACGCGTTTGGCAACAATTTATTTCAGATTGGGAGAGGCAGAGAAGGCACTGAATTGCAATGAAACAAGCTCATGTGTTGATTCGGTACTCGCTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAGCAAATGCACTGAAGCTCGGAAAGTCAAAGATTGGAAAGTTATATTAAATGAAACACAGGCTGCAATATCCTTGGGTGCTGATTCAGCTCCACTGGTCTATTCTTTACATACTGAAGCCCTGCTGAAGCTCCTAAGACATCAAGAGGCACACGCTACCTACGAGAAAATGCCAAAATTTGACCTTGATTCTTCTAACAAATTATTTGGCCCCGTTCGTAGTGCTTACCTATTGATGATAGGCGCGCAAATTTACTTGGCAGCCGGCAGGTTTGAGGATGCTGTAACAGCATCTGAGCAAGCAGCTAAACTAGATCCAAGTAATTTTGAGATGAATGCAGTGGTGAGGAGGGCCAGAGCAGTGACATCAGCCAGAATGAGTGGTAACTTACTCTTCAAGGCATCAAAATTCACGGAAGCATATGCTGTATACAATGAAGGACTAGAGCATGATCCACACAACTCAGTTCTGCTATGCAATAGAGCAGCGTGTCGTTCTAAGCTAGGTCAATTCGAGAAAGCAATTGAAGATTGTAACGTAGCACTTATAATTCAACCTAGTTATAGCAAGGCTAGGTTGCGGAGGGCAGATTGCAATGCCAAGTTGGAACGATGGGAAGCTGCCATTCAAGACTATGAAATGCTATTAAGAGAAAAGCCAGGGGATGAGGAGGTGGCAAGGGCTCTGTTTGAGACCCAGCTCCAACTCAAGATGCTACGCGGTGAAGATATTAAGGACTTGAAATTTGGCTCAAATTTGTTTTTCATCTCAAGCAATGATCGGTTTAGACATTATGTAACATCACCTGGGATGTCTGTGGTACTCTTTTGTAACAAGGCAACCCATAAGCAAGTGTTGTTGGTGTTGGAGCAAACCTGCAAGAGATTTCCATCAGTTAATTTCCTTAAGGTGGAGATTGAAGACCATCCATACTTGGCAAAATCAGAAGGTGTGAACTGCATCCCAGCCTTTAAAATATACAAGAATGGATCAAGGATTAAAGAAATTCCAGGAAACAACCACGATTTGTTGGAAAAATTAGTTAAATTATATAGCAGCTGA 2097 0.4378 MAEKTKNKVEVQLGCGLMGRIFHLKTNNRTRKSSVHSLPVKVCNNTAQQQRDQAKNEAKPSPNHESNVPRDSSIGTIPTLKVEQNPAGKSSSSHRAPSAYQNTQNGRASDAARTSIQRSHDSNEESKQQQKEHAVVNSLELARISTSANHHHHQNNETKSLAKEFVLPITGNLLVNSSPRTSITKSKELNTLSGSCSYNSNNSTNKGMMGNIMRKNSDELAQFRSPRNGRVDPEVLKSMGNEAYKQGRFEEALALYDRAIAVDSKKATYHCNKSAALIGLGRFLQAIVECEEAIKLEPSYGRAHTRLATIYFRLGEAEKALNCNETSSCVDSVLAFQAQALQNHLSKCTEARKVKDWKVILNETQAAISLGADSAPLVYSLHTEALLKLLRHQEAHATYEKMPKFDLDSSNKLFGPVRSAYLLMIGAQIYLAAGRFEDAVTASEQAAKLDPSNFEMNAVVRRARAVTSARMSGNLLFKASKFTEAYAVYNEGLEHDPHNSVLLCNRAACRSKLGQFEKAIEDCNVALIIQPSYSKARLRRADCNAKLERWEAAIQDYEMLLREKPGDEEVARALFETQLQLKMLRGEDIKDLKFGSNLFFISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVNCIPAFKIYKNGSRIKEIPGNNHDLLEKLVKLYSS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0881 698 MobiDBLite consensus disorder prediction 117 131 - -
Gso6g0881 698 Pfam Tetratricopeptide repeat 427 499 - -
Gso6g0881 698 Pfam Tetratricopeptide repeat 513 567 - -
Gso6g0881 698 ProSiteProfiles TPR repeat profile. 420 453 IPR019734 GO:0005515
Gso6g0881 698 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 697 - -
Gso6g0881 698 SUPERFAMILY TPR-like 471 582 IPR011990 GO:0005515
Gso6g0881 698 Coils Coil 540 560 - -
Gso6g0881 698 Pfam TPR repeat 240 275 - -
Gso6g0881 698 Pfam Thioredoxin 630 692 IPR013766 -
Gso6g0881 698 SUPERFAMILY Thioredoxin-like 586 694 IPR036249 -
Gso6g0881 698 Gene3D Tetratricopeptide repeat domain 231 585 IPR011990 GO:0005515
Gso6g0881 698 MobiDBLite consensus disorder prediction 47 135 - -
Gso6g0881 698 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 697 IPR044534 -
Gso6g0881 698 ProSiteProfiles TPR repeat profile. 466 499 IPR019734 GO:0005515
Gso6g0881 698 SMART tpr_5 466 499 IPR019734 GO:0005515
Gso6g0881 698 SMART tpr_5 500 533 IPR019734 GO:0005515
Gso6g0881 698 SMART tpr_5 420 453 IPR019734 GO:0005515
Gso6g0881 698 SMART tpr_5 301 334 IPR019734 GO:0005515
Gso6g0881 698 SMART tpr_5 267 300 IPR019734 GO:0005515
Gso6g0881 698 SMART tpr_5 233 266 IPR019734 GO:0005515
Gso6g0881 698 SMART tpr_5 534 567 IPR019734 GO:0005515
Gso6g0881 698 MobiDBLite consensus disorder prediction 47 116 - -
Gso6g0881 698 SUPERFAMILY TPR-like 233 455 IPR011990 GO:0005515
Gso6g0881 698 CDD TRX_family 607 694 - -
Gso6g0881 698 ProSiteProfiles TPR repeat profile. 233 266 IPR019734 GO:0005515
Gso6g0881 698 Gene3D Glutaredoxin 595 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0881 Gso-Chr6 8390143 8394210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0881 K09527 - gmx:100814381 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0892 4 9629557 9633367 Gso6g0881 6 8390143 8394210 GST
Gso14g1443 14 44892069 44895745 Gso6g0881 6 8390143 8394210 PCT
Gso13g0621 13 20167224 20171056 Gso6g0881 6 8390143 8394210 PCT
Gso6g0881 6 8390143 8394210 Gso14g1443 14 44892069 44895745 PCT
Gso6g0881 6 8390143 8394210 Gso13g0621 13 20167224 20171056 PCT