Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0892 ATGGCAGGGAAAACCAAGAACAAAGTGGAGGTTCAATTGGGTTGCGGTTTGGTGGGGAGAATTTTCCATCTCAAAACCAATAATAGGCCTAGAAAATCCTCTGTTCATTCACTACCCCTGAAGCCTTGCAACACTGCACAACAGAGGGATCAGGGCAAAAACGAATCCAAAGCCCCTCCAAACCATGAACCAAAAGATAGCTCCATTGAAACCATTCCTACACTGAAAGGGGAGCAGAATCCAGCAAGAAAGAGTAGACAACAACAGAAAGATCACCCTGTTGTTAACTCTCTGGAACTTGCCAGGATAAGTACTAGTACCAGTCATCATCAAAACTACGGGACGAAATCCCCGGCCAAAGAATTTGTGTTACCAATCACTGGGAATTTGCTTGTGAATAGCAGCCCAAGAACTAGTGTCACAAAGAGCAAAGAGTTGAACTCTTTGTCCGGTTCCTGTTCTTACAACAGTAATAGTACTAACAAAGGCATGATGGGGAACATCATGAGGAAGAACAGCGATGAGCTTGGGCAATTTCGGAGTCTGAGGAACAGCAGAGTGGACCCTGAGGTGTTGAAGTCCATGGGGAATGAAGCGTACAAGCAGGGAAGATTTGAAGAGGCTTTGGCTTTGTATGACCGAGCCATTGCTGTTGACTCCAAGAAAGCAACATATCATTGCAACAAGAGCGCGGCTTTGATAAGCTTGGGAAGGTTTCTGCAGGCAATTGTTGAGTGTGAGGAAGCTATCAGGTTGGAGCCTTCGTATGGCAGAGCCCACACCCGTTTAGCAACAATTTATTTCAGATTGGGAGAGGCTGAAAAGGCACTGAATTGCAATGAAACAAGCCCATGTGTTGATTCCGTACTTGCTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAGCAAATGCACTGAAGCTCGGAAAGTCAAAGATTGGAAAGTTATATTAAAGGAATCACAGGCTGCAATATCCTTGGGTGCTGATTCAGCTCCACTGGTCTATTGTTTACATACTGAAGCCTTGCTGAAGCTCCTAAGACATCAAGAGGCACACGCTACCTACGAGAAAATGCCAAAATTTGACCTTGATTATTCTAACAAATTATTTGGCCCGGTTCGTAGTGCTTACCTATTGATGATAGGCACACACATTTACTTGGCAACCGGCAGGTTTGAGGATGCAGTGATAGCATCTCAGCAAGCATCTAAGTTAGATCCAAGTAGCTTTGAGGTGAATGCAGTGGTAAGGAGGGCCAGAGCAGTGGCATCAGCCAGAATGAGTGGTAACTTACTCTTCAAGGCATCAAAATTCACGGAAGCATATGCTGTATACAATGAAGGACTAGAGCATGATCCATACAACTCAGTTCTGCTATGCAATAGAGCAGCATGTCGTTCTAAGCTAGGTCAATTCGAGAAAGCAATTGAAGATTGTAATGTGGCACTTATAGTTCAGCCAAGTTATAGCAAGGCAAGGTTGAGGAGGGCAGATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCGATTCAAGATTATGAAATGCTGTTAAGAGAAAAGCCAGGAGATGAGGAGGTGGCCAGGGCCCTGTTTGAGACCCAGCTCCAACTCAAGACGTTGCGTGGTGAAGATATTAAGGACTTGAAATTTGGCTCAAATTTGTTTTTCATCTCAAGCAATGATCGGTTTAGACATTATGTAACATCACCTGGGATGTCTGTGGTGCTTTTCTGTAACAAGGCAACCCACAAACAAGTGTTATTGGTGTTGGAGCAAACCTGCAAGAGATTTCCATCAGTTAATTTTCTTAAGGTTGAGATTGAAGACCACCCTTACTTGGCAAAATCAGAAGGTGTGAACTGCATCCCAGCTTTTAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTCCAGGCAGCAACCACGACTTGTTGGAAAAATTAGTTAAATTATATAGCAACTGA 1965 0.4366 MAGKTKNKVEVQLGCGLVGRIFHLKTNNRPRKSSVHSLPLKPCNTAQQRDQGKNESKAPPNHEPKDSSIETIPTLKGEQNPARKSRQQQKDHPVVNSLELARISTSTSHHQNYGTKSPAKEFVLPITGNLLVNSSPRTSVTKSKELNSLSGSCSYNSNSTNKGMMGNIMRKNSDELGQFRSLRNSRVDPEVLKSMGNEAYKQGRFEEALALYDRAIAVDSKKATYHCNKSAALISLGRFLQAIVECEEAIRLEPSYGRAHTRLATIYFRLGEAEKALNCNETSPCVDSVLAFQAQALQNHLSKCTEARKVKDWKVILKESQAAISLGADSAPLVYCLHTEALLKLLRHQEAHATYEKMPKFDLDYSNKLFGPVRSAYLLMIGTHIYLATGRFEDAVIASQQASKLDPSSFEVNAVVRRARAVASARMSGNLLFKASKFTEAYAVYNEGLEHDPYNSVLLCNRAACRSKLGQFEKAIEDCNVALIVQPSYSKARLRRADCNAKLERWEAAIQDYEMLLREKPGDEEVARALFETQLQLKTLRGEDIKDLKFGSNLFFISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVNCIPAFKIYKNGSRVKEIPGSNHDLLEKLVKLYSN* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0892 654 MobiDBLite consensus disorder prediction 31 54 - -
Gso4g0892 654 SUPERFAMILY Thioredoxin-like 538 650 IPR036249 -
Gso4g0892 654 Pfam Tetratricopeptide repeat 377 408 IPR019734 GO:0005515
Gso4g0892 654 SUPERFAMILY TPR-like 189 411 IPR011990 GO:0005515
Gso4g0892 654 Coils Coil 496 516 - -
Gso4g0892 654 Gene3D Glutaredoxin 551 653 - -
Gso4g0892 654 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 652 - -
Gso4g0892 654 SMART tpr_5 456 489 IPR019734 GO:0005515
Gso4g0892 654 SMART tpr_5 422 455 IPR019734 GO:0005515
Gso4g0892 654 SMART tpr_5 189 222 IPR019734 GO:0005515
Gso4g0892 654 SMART tpr_5 223 256 IPR019734 GO:0005515
Gso4g0892 654 SMART tpr_5 375 409 IPR019734 GO:0005515
Gso4g0892 654 SMART tpr_5 490 523 IPR019734 GO:0005515
Gso4g0892 654 Pfam TPR repeat 196 232 - -
Gso4g0892 654 Gene3D Tetratricopeptide repeat domain 187 541 IPR011990 GO:0005515
Gso4g0892 654 SUPERFAMILY TPR-like 427 538 IPR011990 GO:0005515
Gso4g0892 654 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 652 IPR044534 -
Gso4g0892 654 Pfam Tetratricopeptide repeat 445 477 - -
Gso4g0892 654 ProSiteProfiles TPR repeat profile. 189 222 IPR019734 GO:0005515
Gso4g0892 654 CDD TRX_family 563 650 - -
Gso4g0892 654 Pfam Thioredoxin 586 648 IPR013766 -
Gso4g0892 654 MobiDBLite consensus disorder prediction 28 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0892 Gso-Chr4 9629557 9633367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0892 K09527 - gmx:100787041 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0892 4 9629557 9633367 Gso4g0892 4 9629557 9633367 ECH
Gso4g0892 4 9629557 9633367 Gso6g0881 6 8390143 8394210 GST
Gso14g1443 14 44892069 44895745 Gso4g0892 4 9629557 9633367 PCT
Gso13g0621 13 20167224 20171056 Gso4g0892 4 9629557 9633367 PCT
Gso4g0892 4 9629557 9633367 Gso14g1443 14 44892069 44895745 PCT
Gso4g0892 4 9629557 9633367 Gso13g0621 13 20167224 20171056 PCT