Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1443 ATGGAAATGAAGGCAAAGAACAACAAGAAGGTAGGGAGTGAATTGGGTTGTGGTCTCATGGGGAGAATTCTCCACCTCAAAAGCCATAAGATGAGAAAAGCATCTGTTCATTCCCTACCCTTTAAGAATGCACAGAGTGATGATGATGTCAAAAGTGAAGAATCAAAGGTTTCAAGAAAAAGATCCACTGGCACTGAGCCACCACACAAACCGAGTGGTGTAGAACAAAAACCTGCCAGAAAAAGTGCCTCTATTCACCAACAACCTTGTACAAATCGAAACAACCAACATCAGAGGCATTCAGATGTTGCTGCAAGAAGCTCAACATCATCGTCCTCTAGTACCTCAATTTCAACTAAGGTTGTTCAACAAAACAAGGACAAAAGTCATGAGAGAAAACCACAAGGACAGCCCACTGGAAATTCTCTTGTGCTTGCTAGGATAAGTACTAGCAATGAGAATAATGAGAACAACAAGTCTCAATTGAAACTCACTGGGAATTTGCTTGTGAATAACACCCCAAGAAGGAAGAGTGTGGAATACATGCCTAAGAGTGCAGAGTTGAACTCTGTGCCCAGTTCTTACACCAATGCAAGCAAAGGCTTGATGGGGAATATCTTGAATAGGAACAGCGATGGCAATAAGGTTGCACAGTTTTTGAGTCCAAGGATGAAAAAAGTGGACCCTGAGGTGTCGAAATCCATGGGAAATGATGCATACAAGCAGGGAAGATTTGAAGAGGCCTTGGCTCTGTATGATCGAGCAATTGCACTTGATTCAAATAAGGCAATATATCATTGCAACAAAAGTGCAGCTTTAATTGGCTTAGGAAGGCTTCAGGAAGCAATTGTTGAGTGTGAGGAATCAATCAAGCTGGACCCTTCATATGTCAGAGCCCACAACCGTTTGGCCACAATATATTTCAGGTTGGGAGAAGCAGAAAAAGCACTGAATTGCAATCAGATAACCCCATATGTTGATTCAATACTTACTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAAAAAATGCATAGAAGCACGGAAAGTCAATGCATGGAGTGATATACTAAAGGAAACACAGTCTGCAATATCCTTAGGTTCTGATTCAGCTCCACAGGTCTACGCTTTACAAATTGAAGCCTTGCTGAAGCTCTTAAGATATCAAGAGGCCTATACCATCTACAATAAAATGCCAAAATTTTCAATTGATTGGTGTACCAAGATATTTGGCCCAGCTTGTAGCGCTTACCTATTGATGATAGGCTCAATGATTTACTTGGCATCTGGCAGGTTTGAGGAAGCTGTGACAGCAGCTCAGCAAGCAGTTAAAGTTGATCCAGGCAATAGAGAGCTGAATGCAATGGTAAAGAAGGCCAGAGCAGCAACATCAGCTAGAATGAGCGGAAACTTGCTCTTCAAGGCTTCGAAATTCATCGAAGCATGTGCCGTGTACAACGAAGGACTAGAGCATGATCCACACAACTCAGTTCTACTATGCAACAGAGCTGCATGTCGTTCCAAACTTGGTCAAAATGAGAAAGCAATTGAAGATTGTAACGCGGCACTTATGGTTCAGCCAAGTTATAGCAAAGCAAAGTTAAGGAGGGCAAATTGCAATGCCAAGTTGGAACGGTGGGAAGCTGCTATTCAAGACTATGAAATGCTATTAAGAGAAAGGCCAGGGGATGAGGAAGTGGCAAGGGCTTTGTTTGAAGCTCAGCTCCAACTCAAGATGCTGCGTGGTGAAGATATTAAGGACTTGAAATTTGGTTCAAACTTGGTTTCCATCTCAAGTAATGATCGGTTCAGACATTATGTAACCTCACCTGGTATGGCTGTGGCGCTTTTTACCAACAAGGCAACCCACAAGAAAGTGTTGCTTGTGTTGGAGCAAATCAGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTGGAAATCGAAGACCACCCCTACTTAGCAAAGTCAGAAAGTGTGAGCTCTATCCCAGCCTTCAAGATATACAAGAACGGATCTAGCGTTAAAGAAATTTCAGGAAACAACCACGAGTTGTTAGAAAGATCAGTTAAATTGTATAGCAGCTGA 2085 0.4225 MEMKAKNNKKVGSELGCGLMGRILHLKSHKMRKASVHSLPFKNAQSDDDVKSEESKVSRKRSTGTEPPHKPSGVEQKPARKSASIHQQPCTNRNNQHQRHSDVAARSSTSSSSSTSISTKVVQQNKDKSHERKPQGQPTGNSLVLARISTSNENNENNKSQLKLTGNLLVNNTPRRKSVEYMPKSAELNSVPSSYTNASKGLMGNILNRNSDGNKVAQFLSPRMKKVDPEVSKSMGNDAYKQGRFEEALALYDRAIALDSNKAIYHCNKSAALIGLGRLQEAIVECEESIKLDPSYVRAHNRLATIYFRLGEAEKALNCNQITPYVDSILTFQAQALQNHLKKCIEARKVNAWSDILKETQSAISLGSDSAPQVYALQIEALLKLLRYQEAYTIYNKMPKFSIDWCTKIFGPACSAYLLMIGSMIYLASGRFEEAVTAAQQAVKVDPGNRELNAMVKKARAATSARMSGNLLFKASKFIEACAVYNEGLEHDPHNSVLLCNRAACRSKLGQNEKAIEDCNAALMVQPSYSKAKLRRANCNAKLERWEAAIQDYEMLLRERPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVSISSNDRFRHYVTSPGMAVALFTNKATHKKVLLVLEQISKRFPSVNFLKVEIEDHPYLAKSESVSSIPAFKIYKNGSSVKEISGNNHELLERSVKLYSS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1443 694 MobiDBLite consensus disorder prediction 30 141 - -
Gso14g1443 694 ProSiteProfiles TPR repeat profile. 416 449 IPR019734 GO:0005515
Gso14g1443 694 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 3 693 IPR044534 -
Gso14g1443 694 Pfam TPR repeat 236 268 - -
Gso14g1443 694 SUPERFAMILY TPR-like 229 451 IPR011990 GO:0005515
Gso14g1443 694 SMART tpr_5 297 330 IPR019734 GO:0005515
Gso14g1443 694 SMART tpr_5 415 449 IPR019734 GO:0005515
Gso14g1443 694 SMART tpr_5 229 262 IPR019734 GO:0005515
Gso14g1443 694 SMART tpr_5 496 529 IPR019734 GO:0005515
Gso14g1443 694 SMART tpr_5 263 296 IPR019734 GO:0005515
Gso14g1443 694 SMART tpr_5 530 563 IPR019734 GO:0005515
Gso14g1443 694 SMART tpr_5 462 495 IPR019734 GO:0005515
Gso14g1443 694 CDD TRX_family 603 681 - -
Gso14g1443 694 SUPERFAMILY TPR-like 465 578 IPR011990 GO:0005515
Gso14g1443 694 MobiDBLite consensus disorder prediction 81 123 - -
Gso14g1443 694 Pfam Thioredoxin 627 685 IPR013766 -
Gso14g1443 694 ProSiteProfiles TPR repeat profile. 229 262 IPR019734 GO:0005515
Gso14g1443 694 SUPERFAMILY Thioredoxin-like 587 686 IPR036249 -
Gso14g1443 694 Coils Coil 529 556 - -
Gso14g1443 694 Gene3D Tetratricopeptide repeat domain 228 581 IPR011990 GO:0005515
Gso14g1443 694 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 3 693 - -
Gso14g1443 694 Pfam Tetratricopeptide repeat 508 563 - -
Gso14g1443 694 Pfam Tetratricopeptide repeat 425 495 - -
Gso14g1443 694 MobiDBLite consensus disorder prediction 44 66 - -
Gso14g1443 694 Gene3D Glutaredoxin 589 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1443 Gso-Chr14 44892069 44895745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1443 210 532 Glycosyltransferase AT3G04240 20.427 2.01e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1443 K09527 - gmx:100782846 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1443 14 44892069 44895745 Gso13g0621 13 20167224 20171056 GST
Gso14g1443 14 44892069 44895745 Gso4g0892 4 9629557 9633367 PCT
Gso14g1443 14 44892069 44895745 Gso6g0881 6 8390143 8394210 PCT
Gso4g0892 4 9629557 9633367 Gso14g1443 14 44892069 44895745 PCT
Gso6g0881 6 8390143 8394210 Gso14g1443 14 44892069 44895745 PCT