Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0607 ATGAACACTACTCTCTCTGAAGCCTACAAAGCACACCCTCTCCACCTCCGTGACATTATTCCCTTAGACTTTTCTTCAGCCCATAGCTTACCTGATTCTCACGCATGGTCTCACTCTCAACCCAACGATGATGATTATGTCTCATTCAATGATGATGCATCATCATCATCATTCATACCCATCATAGACCTCATGGATCCAAATGCCATGGAACAAATAGGCCATGCATGTGAGAAATGGGGTGCTTTCCAATTGAAGAACCATGGCATACCCTTTTGTGTTATTGAAGATGTAGAAGAAGAGGCTAAAAGGCTCTTTGCTCTTCCCACTGAACAGAAGTTGAAGGCTCTTCGATCTCCTGGTGGTGCGACGGGGTATGGCAGAGCAAGGATTTCACCGTTCTTCCCAAAGTTCATGTGGCATGAAGGGTTTACCATCATTGGTTCTCCCTCTCATGATGCCAAAAAGATATGGCCTAACGATCATGCAGGGTTTTGTGATTTGATGGAGAATTATGAGAAGCAAATGAAGGTTCTAGCGGAGAGACTAACACAGATGATGTTCAGCTTAATGGACATAAGTGAGGAGAAAACAAAGTGGGTTGGTGCAAGCAACATAAGTGGAGCTGTTCAGTTAAATTTTTACCCAAGTTGTCCCGAGCCAAACCGAGCCATGGGCTTAGCCCCTCACACAGACACTTCTCTCTTCACAATTCTTCACCAAAGCCGAATCACTGGTCTTCAAATCTTCAAGGAAGGAAAAGAGTGGGTTCCTGTGCACCCTCACCCTAACACCCTGGTCGTGCACACTGGAGATCTCTTGCACATCATTTCCAACGCCAGGTTCCGTAGTGCACTTCACCGTGTAACGGTGAATAGTACACGGGAACGTTACTCTGTGGCTTATTTCTATTCTCCACCGTTAGATTATGTGGTTTCTCCTTTAGTTGACTCTGTCGCTCGTTTTCGTGATGTGACTGTGAAGGAGTATATTGGGATCAAAGCCAAGAATTTTGGAGAAGCATTGTCTTTGATTAGTACTTGA 1044 0.4483 MNTTLSEAYKAHPLHLRDIIPLDFSSAHSLPDSHAWSHSQPNDDDYVSFNDDASSSSFIPIIDLMDPNAMEQIGHACEKWGAFQLKNHGIPFCVIEDVEEEAKRLFALPTEQKLKALRSPGGATGYGRARISPFFPKFMWHEGFTIIGSPSHDAKKIWPNDHAGFCDLMENYEKQMKVLAERLTQMMFSLMDISEEKTKWVGASNISGAVQLNFYPSCPEPNRAMGLAPHTDTSLFTILHQSRITGLQIFKEGKEWVPVHPHPNTLVVHTGDLLHIISNARFRSALHRVTVNSTRERYSVAYFYSPPLDYVVSPLVDSVARFRDVTVKEYIGIKAKNFGEALSLIST* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0607 347 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 341 - -
Gso6g0607 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 159 IPR026992 -
Gso6g0607 347 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 13 341 - -
Gso6g0607 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 306 IPR005123 -
Gso6g0607 347 SUPERFAMILY Clavaminate synthase-like 18 339 - -
Gso6g0607 347 Pfam 2OG-Fe(II) oxygenase superfamily 210 306 IPR044861 -
Gso6g0607 347 Gene3D - 18 338 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0607 Gso-Chr6 5638980 5641051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0607 59 330 Glycosyltransferase AT5G59530 30.272 2.64e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0607 K04124 - gmx:100794325 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0609 4 5889434 5891468 Gso6g0607 6 5638980 5641051 GST
Gso14g1043 14 17445803 17448558 Gso6g0607 6 5638980 5641051 PCT
Gso17g1738 17 33649761 33652345 Gso6g0607 6 5638980 5641051 PCT