Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1738 ATGGCCACTACTCTTTCTGAAGCCTATAGGGACCACCCTCTCCACCTTCATCATATTATCCCCTTAGACTTTTCTTCACTTAGGACCTTACCTGATTCGCATGCATGGCCTCAATCTGAAGATGGTGATGGTGATGATGATAATCATGGAATTGGATCACCCATACCCATCATAGACCTAATGGATCCTAATGCCATGGAACTCATAGGCCTTGCTTGTGAGAATTGGGGTGCTTTCCAATTGAAGAACCATGGCATACCCTTGAGTGTTGTTGAAGAGGTTGAAGAAGAGGCAAAGAGGCTCTTTGCCCTCCCCGCCGACCGGAAACTCAAGGCGTTGAGATCGGCCACCGGTGCCACCGGGTACGGCCGAGCTCGGATATCGCCATTCTTCCCCAAGCACATGTGGCATGAAGGATTTACCATCATGGGGTCTCCATGTGATGATGCCAAAAAGATTTGGCCTAATGACTATGCACCCTTTTGCACTATAATGGACAATTACCAGAAGCAAATGAAGGCTCTAGCAGATAAGCTAGCACACATGATATTCAACTTATTGGGGGGCATTTCTGAGGAGCAAAAAAGGTGGATTAATGGTTCAACCAACAACCTCTGTGAAGCTGTTCAGCTAAACTTCTACCCTCGTTGTCCTGAGCCAAACCGAGCCATGGGGCTAGCCCCTCACACTGACACTTCCCTTCTCACAATCCTCCACCAAAGCCAAACCAATGGCCTCCAAATCTTCAAGGAAGGGGCAGGGTGGGTCCCTGTGCACCCTCACCCTAGCAGCCTTGTTGTTCACACTGGTGACATTCTTCACATCTTGTCCAACTCAAGGTTTAGATGTGCATTGCATCGTGTCATGGTGAATAGCGCAAGGGAAAGATACTCAGTGGCTTATTTCTATGGTCCCCCTGTGGATCATGTGGTTTCTCCTTTGGTTCTTGATTCCTTGCCTCGTTTTCGTTCCTTGACTGTGAAGGAGTATATTGGTATTAAGGCCAAGAACCTTCGGGGAGCATTGTCTTTGATTAGTATGCTTAAAAACTAA 1053 0.4748 MATTLSEAYRDHPLHLHHIIPLDFSSLRTLPDSHAWPQSEDGDGDDDNHGIGSPIPIIDLMDPNAMELIGLACENWGAFQLKNHGIPLSVVEEVEEEAKRLFALPADRKLKALRSATGATGYGRARISPFFPKHMWHEGFTIMGSPCDDAKKIWPNDYAPFCTIMDNYQKQMKALADKLAHMIFNLLGGISEEQKRWINGSTNNLCEAVQLNFYPRCPEPNRAMGLAPHTDTSLLTILHQSQTNGLQIFKEGAGWVPVHPHPSSLVVHTGDILHILSNSRFRCALHRVMVNSARERYSVAYFYGPPVDHVVSPLVLDSLPRFRSLTVKEYIGIKAKNLRGALSLISMLKN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1738 350 Gene3D - 17 338 IPR027443 -
Gso17g1738 350 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 341 - -
Gso17g1738 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 155 IPR026992 -
Gso17g1738 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 305 IPR005123 -
Gso17g1738 350 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 341 - -
Gso17g1738 350 MobiDBLite consensus disorder prediction 33 53 - -
Gso17g1738 350 SUPERFAMILY Clavaminate synthase-like 17 339 - -
Gso17g1738 350 Pfam 2OG-Fe(II) oxygenase superfamily 208 305 IPR044861 -
Gso17g1738 350 PRINTS Isopenicillin N synthase signature 69 86 - -
Gso17g1738 350 PRINTS Isopenicillin N synthase signature 229 250 - -
Gso17g1738 350 PRINTS Isopenicillin N synthase signature 265 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1738 Gso-Chr17 33649761 33652345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1738 55 341 Glycosyltransferase AT5G59530 31.310 3.99e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1738 K04124 - gmx:100808546 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1043 14 17445803 17448558 Gso17g1738 17 33649761 33652345 GST
Gso17g1738 17 33649761 33652345 Gso4g0609 4 5889434 5891468 PCT
Gso17g1738 17 33649761 33652345 Gso6g0607 6 5638980 5641051 PCT