Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0609 ATGAACACTCTCTCTGAAGCCTACAAAGCACACCCTCTCCACCTCAGTCACATTATTCCCTTAGACTTTTCTTCAGCCCTTAGCTTACCTGATTCTCACGCATGGCCTCACTGTCAACCCAATGATGATGCATCATCATCATCATCATCATCATCCATACCCATCATAGACCTCATGGATCCCAATGCTATGGACCTCATAGGCCATGCATGTGAGAAGTGGGGTGCTTTCCAATTGAAGAACCATGGCATACCTTTTGGTGTCATTGAAGATGTTGAAGAAGAGGCTAAAAGACTTTTTGCTCTTCCCACTGAACAGAAGTTGAAGGCTCTTCGATCTCCCGGTGGTGCCACTGGGTATGGCAGAGCAAGGATTTCACCGTTCTTCCCAAAGTTTATGTGGCACGAAGGATTCACCATCATTGGCTCTCCCTCTCACGATGCCAAAAAGATATGGCCTAATGATTATGCACGCTTTTGTGATTTGATGGAGAATTATGAGAAGCAAATGAAGGTTCTAGCGGATAGACTAACAGAGATGATATTCAACTTAATGGACATAAGTGAGGAAAAAAGAAAGTGGGTTGGTGCAAGCAACATAAGTGAAGCTGTTCAGTTAAATTTCTACCCAAGTTGTCCCGAGCCAAACCGAGCCATGGGCTTAGCCCCTCACACCGACACTTCTCTCTTCACAATTCTTCACCAAAGTCAAATCACTGGTCTTCAAATCTTCAAGGAAGGAAAAGGGTGGGTTCCTGTGCACCCTCACCCTAATACCCTGGTCGTGCACACAGGCGATCTCTTGCACATCATTTCCAACGCAAGGTTTCGCTGTGCACTTCACCGCGTAACGGTGAATAGGACATGGGAACGTTACTCTGTGGCTTATTTCTATTCTCCACCGATGGATTATGTAGTTTCTCCTTTGGTTCACTCTGTTGCTCGTTTTCGTGATGTGACTGTGAAGGAGTATATTGGGATTAAGGCTAAGAATTTTGGAGAAGCATTGTCCTTTATTAGTACTTGA 1026 0.4483 MNTLSEAYKAHPLHLSHIIPLDFSSALSLPDSHAWPHCQPNDDASSSSSSSSIPIIDLMDPNAMDLIGHACEKWGAFQLKNHGIPFGVIEDVEEEAKRLFALPTEQKLKALRSPGGATGYGRARISPFFPKFMWHEGFTIIGSPSHDAKKIWPNDYARFCDLMENYEKQMKVLADRLTEMIFNLMDISEEKRKWVGASNISEAVQLNFYPSCPEPNRAMGLAPHTDTSLFTILHQSQITGLQIFKEGKGWVPVHPHPNTLVVHTGDLLHIISNARFRCALHRVTVNRTWERYSVAYFYSPPMDYVVSPLVHSVARFRDVTVKEYIGIKAKNFGEALSFIST* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0609 341 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 335 - -
Gso4g0609 341 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 11 335 - -
Gso4g0609 341 SUPERFAMILY Clavaminate synthase-like 18 333 - -
Gso4g0609 341 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Gso4g0609 341 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 300 IPR005123 -
Gso4g0609 341 Pfam 2OG-Fe(II) oxygenase superfamily 202 300 IPR044861 -
Gso4g0609 341 Gene3D - 17 326 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0609 Gso-Chr4 5889434 5891468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0609 43 324 Glycosyltransferase AT5G59530 30.263 9.24e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0609 K04124 - gmx:100818754 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0609 4 5889434 5891468 Gso6g0607 6 5638980 5641051 GST
Gso14g1043 14 17445803 17448558 Gso4g0609 4 5889434 5891468 PCT
Gso17g1738 17 33649761 33652345 Gso4g0609 4 5889434 5891468 PCT