Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1043 ATGGTTACTACTCTTTCTGAAGCCTATAGGGACCACCCTCTCCACCTTCATCATATTATCCCCTTAGACTTTTCTTCACTTAGGACCATACCTGATTCCCATGCATGGCCTCAATCTGAAGATGGTGATGATGATAATCATGGAGCTGGATCATGCATACCCATCATTGACCTCATGGATCCTAGTGCCATGGAACTCATAGGCCTTGCTTGTGAGAATTGGGGTGCCTTCCAATTGACGAACCATGGCATACCCTTGAGTGTTGCTGAAGGGGTTGAAGAAGAGGCAAAGAGGCTCTTCGCACTCCCTGCCGACCAGAAACTGAAGGCATTGAGATCGGCCGCCGGTGCCACCGGCTACGGCCGAGCTCGGATATCACCGTTCTTCCCCAAGCACATGTGGCATGAAGGGTTCACCATCATGGGGTCTCCATGTGATGATGCCAAAAAGATCTGGCATAATGACTGTGCACGGTTTTGCCACATAATGAACAATTACCAGAAACAAATGAAGGCTCTAGCAGAGAAGCTAACACACATGATATTCAACTTATTGGGGAATATTTCTGAGGAACAAAAGCGGTGGATTGGTTCAACCAACCTCTGTGAAGCTGTTCAGTTAAACTTCTACCCTTGTTGCCCCGAGCCTAACCGAGCCATGGGCCTTGCCCCTCACACAGACACTTCCCTCCTCACAATCCTCCACCAAAGCCAAACCAATGGCCTCCAGATCTTCCAGGAAGGAGCAGGGTGGGTCCCTGTGCACCCTCACCCTGGCACCCTTTTTGTTCACACTGGTGACATACTTCACATCTTGTCCAACTCATGGTTTAGATGTGCACTGCATCGTGTCATGGTGAATAGTATGAGGCAAAGATACTCAGCGGCTTATTTCTATGCCCCCCCTATGGATCATGTAGTTTCTCCTTTGGTTCTTGATTCCTTGCCTCGGTTTCGTTCCTTGACTGTGAAGGAGTATATTGGCATTAAGGCCAAGAACCTTGGGGGAGCATTGTCGTTGATTAGTATGCTTAATAATAACTAA 1044 0.4818 MVTTLSEAYRDHPLHLHHIIPLDFSSLRTIPDSHAWPQSEDGDDDNHGAGSCIPIIDLMDPSAMELIGLACENWGAFQLTNHGIPLSVAEGVEEEAKRLFALPADQKLKALRSAAGATGYGRARISPFFPKHMWHEGFTIMGSPCDDAKKIWHNDCARFCHIMNNYQKQMKALAEKLTHMIFNLLGNISEEQKRWIGSTNLCEAVQLNFYPCCPEPNRAMGLAPHTDTSLLTILHQSQTNGLQIFQEGAGWVPVHPHPGTLFVHTGDILHILSNSWFRCALHRVMVNSMRQRYSAAYFYAPPMDHVVSPLVLDSLPRFRSLTVKEYIGIKAKNLGGALSLISMLNNN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1043 347 Gene3D - 17 333 IPR027443 -
Gso14g1043 347 PRINTS Isopenicillin N synthase signature 67 84 - -
Gso14g1043 347 PRINTS Isopenicillin N synthase signature 225 246 - -
Gso14g1043 347 PRINTS Isopenicillin N synthase signature 261 287 - -
Gso14g1043 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 301 IPR005123 -
Gso14g1043 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 146 IPR026992 -
Gso14g1043 347 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 337 - -
Gso14g1043 347 Pfam 2OG-Fe(II) oxygenase superfamily 204 301 IPR044861 -
Gso14g1043 347 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 337 - -
Gso14g1043 347 SUPERFAMILY Clavaminate synthase-like 17 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1043 Gso-Chr14 17445803 17448558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1043 25 337 Glycosyltransferase AT5G59530 29.204 7.28e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1043 K04124 - gmx:100780857 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1043 14 17445803 17448558 Gso17g1738 17 33649761 33652345 GST
Gso14g1043 14 17445803 17448558 Gso4g0609 4 5889434 5891468 PCT
Gso14g1043 14 17445803 17448558 Gso6g0607 6 5638980 5641051 PCT