Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0604 ATGGAGTCCTTAAAGGCGCAAGAAGGAGGAGAGGAGCAAGTGAAGTGCGTGTGGGTTCATGGCCCTATCATCGTAGGAGCAGGACCCTCAGGGCTAGCCGTCGCCGCGTGCCTCTCCCACCACGGAGTACCCTACGTCATTCTCGAGAGAACAAACTGCATAACCTCACTTTGGCAACACAGAACCTACGACCGCCTCAAACTCCACCTCCCTAAACACTTCTGCGAACTCCCCTTAATACCCTTTCCCCTCCATTTCCCAAAATACCCCTCCAAGAACCAGTTCATCTCCTACCTCAACTCCTACGCTTCACGCTTCAACATCCGCCCCAGGTTCAACCAGTCCGTTCAGACCGCCCAGTTCGACCCTTGTTCTCAGCTTTGGGTCGTCAAAACCAATGGTTTTCAGTACATTTCGCCGTGGCTTGTGGTTGCTACTGGAGAGAATGCTGAACCCGTTGTTCCCTCGATTTCTGGCATGGACAAGTTTCGCGGACCCATTGTTCACACCAGCGTCTATAAATCTGGTTCTGATTACAAGAACCAGAGGGTTTTGGTCATTGGTTGCGGCAACTCGGGTATGGAAGTTAGCTTGGATCTTTGCAGGCACAACGCCAACCCTTACATGGTTGCAAGAAACACAGTACATGTTTTGCCTATGGAGATGTTTGGGTTTTCGACGTTTGGAATAGCTATGGCTCTCTTGAAATGGCTTCCAATAAAGTTAGTAGACAAGTTGGTTTTGGCGGCGGCTAGGTTAATGTTGGGTGACACCGCTCGCTATGGCGTTAGAAGGCCCAAAACAGGGCCTATCGAGCTCAAACTAGTTACCGGGAAAACCCCTGTGCTTGATGTTGGACAAGTCGCTCAAATAAGATCCGGTAACATCAAGGTGATGGAAGGAGTGAAGGAGATAACAAGAAACGGTGCCAAGTTTATGGATGGACAAGAAAAGGAGTTCAGCGCTATAATATTGGCGACGGGATACAAAAGCAACGTGCCCACTTGGCTTAAGAGTTGTGAATCTTTCACGAAAGACGGAATGCCTAAAACGCCGTTTCCAATGGGTTGGAAGGGAGAGAACGGATTGTATACAGTGGGGTTCACGAGAAGAGGTCTTCTTGGAACTGCATCGGATGCCGTAAAAATTGCTAAAGACATCGCTGATCAATGGATGACCGTTAAGGACAGATCATACTGTAATTCCCACATCATCTTTCTCAAGAGTACATAG 1233 0.4874 MESLKAQEGGEEQVKCVWVHGPIIVGAGPSGLAVAACLSHHGVPYVILERTNCITSLWQHRTYDRLKLHLPKHFCELPLIPFPLHFPKYPSKNQFISYLNSYASRFNIRPRFNQSVQTAQFDPCSQLWVVKTNGFQYISPWLVVATGENAEPVVPSISGMDKFRGPIVHTSVYKSGSDYKNQRVLVIGCGNSGMEVSLDLCRHNANPYMVARNTVHVLPMEMFGFSTFGIAMALLKWLPIKLVDKLVLAAARLMLGDTARYGVRRPKTGPIELKLVTGKTPVLDVGQVAQIRSGNIKVMEGVKEITRNGAKFMDGQEKEFSAIILATGYKSNVPTWLKSCESFTKDGMPKTPFPMGWKGENGLYTVGFTRRGLLGTASDAVKIAKDIADQWMTVKDRSYCNSHIIFLKST* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0604 410 Pfam Pyridine nucleotide-disulphide oxidoreductase 23 214 - -
Gso6g0604 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 21 43 - -
Gso6g0604 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 140 148 - -
Gso6g0604 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 179 203 - -
Gso6g0604 410 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 13 403 - -
Gso6g0604 410 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 13 403 - -
Gso6g0604 410 SUPERFAMILY FAD/NAD(P)-binding domain 180 386 IPR036188 -
Gso6g0604 410 Gene3D - 22 397 IPR036188 -
Gso6g0604 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 22 41 - -
Gso6g0604 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 183 201 - -
Gso6g0604 410 SUPERFAMILY FAD/NAD(P)-binding domain 23 286 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0604 Gso-Chr6 5567341 5570156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0604 K11816 - gmx:100793803 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0604 4 5827326 5830362 Gso6g0604 6 5567341 5570156 GST
Gso14g1040 14 17005376 17008431 Gso6g0604 6 5567341 5570156 PCT
Gso17g1746 17 33807054 33810026 Gso6g0604 6 5567341 5570156 PCT
Gso6g0604 6 5567341 5570156 Gso14g1040 14 17005376 17008431 PCT
Gso6g0604 6 5567341 5570156 Gso17g1746 17 33807054 33810026 PCT