Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0604 ATGGAGTCCTTAAAGGGTGAAGAAGTAAAGTGCGTGTGGGTTCAGGGCCCTATCATCGTAGGAGCAGGACCCTCAGGGCTAGCCGTGGCCGCGTGCCTCTCCCACCATGGAGTGCCCTACGTCATTCTCGAGAGGAGCCACTGCATCACCTCCCTCTGGCAACACAGAACCTACGACCGTCTCAAACTCCACCTCCCCAAACACTTCTGCGAACTCCCCCTGATGCCCTTCCCCCTCCATTTCCCAAAATACCCCTCCAAGAACCAGTTCATCTCCTACCTCAACTCCTACGCTTCTCGCTTCAACATCCGCCCCAGGTTCAACCAATCCGTTCAGACCGCCGAGTTCGACCCTTCTTCTCAGCTTTGGCTCGTCAGAACCAACGGTTTTCAGTACATTTCCCCGTGGCTCGTCGTTGCTACCGGAGAGAATGCTGAGCCTGTTGTTCCCTCCATTTCTGGCATGGACATGTTTCACGGTCCCATTGTTCACACCAGCGTCTACAAATCTGGTTCTGATTACAATAACCAGAGGGTCTTGGTCATTGGCTGCGGCAACTCCGGTATGGAAGTTAGCTTGGATCTTTGCCGCCACAACGCCAACCCTTACATGGTTGCAAGAAACACAGTACATGTTTTGCCTAGAGAGATGTTTGGGTTTTCGACGTTTGGAATAGCTATGGCTCTCTTGAAATGGCTTCCAATAAAGGTAGTAGACAAGTTGGTTTTGGCGGCGGCTAGGTTAATGTTGGGTGACACCGCTCGTTATGGCGTTAGGAGGCCCAAAACGGGGCCTATAGAGCTCAAACTAGTAACCGGGAAAACCCCTGTGCTTGATGTTGGACAAGTGGCTCAAATAAGATCCGGTAACATAAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAGTTTATGGATGGACAAGAAAAGGAGTTCAGCGCTATAATATTGGCAACGGGATACAAAAGCAACGTGCCCACTTGGCTTAAGAGCTGTGAATCTTTCACCAAAGACGGAATGCCGAAAACTCCGTTTCCAATGGGTTGGAAGGGAGAGAACGGATTATATACAGTGGGGTTCACGAGAAGAGGTCTTCTTGGAACTGCATCAGATGCCGTAAAAATTGCTAAAGACATCGCTGATCAATGGATGACCGTTAAGGACAAATCATACCGTAATTCCCACATCATCTTGCTCAAGAGTACATAG 1218 0.4959 MESLKGEEVKCVWVQGPIIVGAGPSGLAVAACLSHHGVPYVILERSHCITSLWQHRTYDRLKLHLPKHFCELPLMPFPLHFPKYPSKNQFISYLNSYASRFNIRPRFNQSVQTAEFDPSSQLWLVRTNGFQYISPWLVVATGENAEPVVPSISGMDMFHGPIVHTSVYKSGSDYNNQRVLVIGCGNSGMEVSLDLCRHNANPYMVARNTVHVLPREMFGFSTFGIAMALLKWLPIKVVDKLVLAAARLMLGDTARYGVRRPKTGPIELKLVTGKTPVLDVGQVAQIRSGNIKVMEGVKEITRNGAKFMDGQEKEFSAIILATGYKSNVPTWLKSCESFTKDGMPKTPFPMGWKGENGLYTVGFTRRGLLGTASDAVKIAKDIADQWMTVKDKSYRNSHIILLKST* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0604 405 SUPERFAMILY FAD/NAD(P)-binding domain 175 381 IPR036188 -
Gso4g0604 405 SUPERFAMILY FAD/NAD(P)-binding domain 18 284 IPR036188 -
Gso4g0604 405 PRINTS FAD-dependent pyridine nucleotide reductase signature 17 36 - -
Gso4g0604 405 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Gso4g0604 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 16 38 - -
Gso4g0604 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 135 143 - -
Gso4g0604 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 198 - -
Gso4g0604 405 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 8 393 - -
Gso4g0604 405 Gene3D - 17 392 IPR036188 -
Gso4g0604 405 Pfam Pyridine nucleotide-disulphide oxidoreductase 18 209 - -
Gso4g0604 405 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Gso4g0604 405 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 8 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0604 Gso-Chr4 5827326 5830362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0604 K11816 - gmx:100789347 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0604 4 5827326 5830362 Gso6g0604 6 5567341 5570156 GST
Gso14g1040 14 17005376 17008431 Gso4g0604 4 5827326 5830362 PCT
Gso17g1746 17 33807054 33810026 Gso4g0604 4 5827326 5830362 PCT
Gso4g0604 4 5827326 5830362 Gso14g1040 14 17005376 17008431 PCT
Gso4g0604 4 5827326 5830362 Gso17g1746 17 33807054 33810026 PCT