Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1746 ATGGGTTCTTGCAACAAACCCCAACAACAACAACAACAACATGTTCAAGGCCCTATTATCATAGGAGCTGGTCCTTCAGGCTTAGCCGTGGCTGCGTGTCTCTCAGAACACAAAGTTCCTTTCGTAATTCTTGAGAGACACAACTGCATAGCCTCCCTTTGGCAAAACAAAACCTACGACCGTCTCAAACTCCACCTCCCTAAACAGTTCTGCGAGCTTCCCTTAAAGGGTTTTCCCCACACTTTCCCAAAATACCCCACAAAGTACCAGTTCATATCCTACATGGAGTCCTACGCTTCACACTTCAACATTCACCCTATCTTCAACCAAACCGTGGAAAGTGCTGACTTTGATAAAGGGTCGAAGGTTTGGGTGGTTAAAACTCAAGAGGTTGATTATTCTTCTCGCTGGCTTGTGGTGGCTACTGGTGAAAATGCTGAACCTGTTGTGCCTAGGATTCATGGGATGGAGCTTTTTAATGGTGATGTTGCTCACACTAGCGTGTATAAGTCTGGCTCTGAGTATAGGAACAAGAAGGTTTTGGTCATTGGGTGTGGTAATTCGGGAATGGAAGTTTGCTTGGACCTTTGTAGACACAATGCCAAACCTTACATGGTTGCTAGAAATACAGTACATGTGCTTCCTAGAGAGATGTTTGGCTTCTCAACATTTGGGGTTGCTATGGCGCTCTATAAGTGGTTTCCCATTAAGTTAGTAGACAAGATCATCTTGCTTGCAACAAACTTCATTTTGGGCAACACCAATCACTATGGCATCAAGAGGCCCAAAACCGGCCCAATAGAGCTCAAACTCGCCACAGGGAAAACCCCAGTCCTTGATGTTGGTCAAGTTGCACAAATAAAATGTGGTAACATAAAGGTGATGGAGGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTATGGATGGACAAGAAAAGGAATTCGATGCTATAATCTTGGCAACAGGATACAAGAGCAACGTGCCTACTTGGCTCAAGGGATGTGATTTTTTCACGGAAGATGGAATGCCCAAAACACCCTTTCCTCATGGGTGGAAAGGAGAGCAGGGATTGTATACGGTGGGGTTCACAAGAAGAGGTCTTCAAGGAACGTCGTGTGATGCAATCAAGATCGCTGAAGACATAGCTGAACAGTGGAGAACCGTAGAGGACAAGAGTCACTGCGATTCACATATCATCCTACTCAATAATTCATAG 1221 0.4472 MGSCNKPQQQQQQHVQGPIIIGAGPSGLAVAACLSEHKVPFVILERHNCIASLWQNKTYDRLKLHLPKQFCELPLKGFPHTFPKYPTKYQFISYMESYASHFNIHPIFNQTVESADFDKGSKVWVVKTQEVDYSSRWLVVATGENAEPVVPRIHGMELFNGDVAHTSVYKSGSEYRNKKVLVIGCGNSGMEVCLDLCRHNAKPYMVARNTVHVLPREMFGFSTFGVAMALYKWFPIKLVDKIILLATNFILGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKCGNIKVMEGVKEITRNGAKFMDGQEKEFDAIILATGYKSNVPTWLKGCDFFTEDGMPKTPFPHGWKGEQGLYTVGFTRRGLQGTSCDAIKIAEDIAEQWRTVEDKSHCDSHIILLNNS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1746 406 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 12 397 - -
Gso17g1746 406 Pfam Pyridine nucleotide-disulphide oxidoreductase 19 210 - -
Gso17g1746 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 18 37 - -
Gso17g1746 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 179 197 - -
Gso17g1746 406 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 12 397 - -
Gso17g1746 406 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Gso17g1746 406 SUPERFAMILY FAD/NAD(P)-binding domain 178 388 IPR036188 -
Gso17g1746 406 Gene3D - 6 390 IPR036188 -
Gso17g1746 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 17 39 - -
Gso17g1746 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 136 144 - -
Gso17g1746 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 175 199 - -
Gso17g1746 406 SUPERFAMILY FAD/NAD(P)-binding domain 19 211 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1746 Gso-Chr17 33807054 33810026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1746 K11816 - gmx:100798781 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1040 14 17005376 17008431 Gso17g1746 17 33807054 33810026 GST
Gso17g1746 17 33807054 33810026 Gso4g0604 4 5827326 5830362 PCT
Gso17g1746 17 33807054 33810026 Gso6g0604 6 5567341 5570156 PCT
Gso4g0604 4 5827326 5830362 Gso17g1746 17 33807054 33810026 PCT
Gso6g0604 6 5567341 5570156 Gso17g1746 17 33807054 33810026 PCT