Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1040 ATGGGTCGTTCTTGCAACAAATCCCAACAACAACATGTTGAAGGCCCTATCATTATAGGTGCTGGTCCTTCGGGCTTAGCCGTGGCTGCGTGTCTCTCAGAAGATAAAGTTCCTTTTGTGATTCTTGAGAGACACAACTGCATAGCCTCCCTTTGGCAAAACAAAACCTACGACCGTCTCAAACTCCACCTCCCTAAACAGTTCTGCGAGCTTCCCTTGAAGGGCTTTCCCCACACTTTCCCAAAATACCCCACAAAGTACCAGTTTATCTCCTACATGGAGTCCTATGCTTCACACTTCAACATTCACCCCATCTTCAACCAAACTGTGAAAAGTGCTGAGTTTGATAAAGGGTCAAATGTTTGGGTTGTTAGAACTGAAGAGTTCGAGTATTCTTCTCGCTGGCTAGTGGTGGCCACTGGAGAAAATGCTGAACCTGTTGTGCCTAGGATTCATGGGATGGAGCTTTTTGGTGGTGCTGTTGCTCACACTAGTGTGTATAAGTCTGGCTCTGAGTATAGGAACAAGAAGGTTTTGGTCATTGGGTGTGGCAATTCGGGTATGGAAGTTTGCTTGGACCTTTGTAGACACAATGCCAAACCTTACATGGTTGCTAGAAATACAGTACATGTGCTTCCTAGGGAGATGTTAGGCTTCTCAACGTTTGGGATAGCTATGGCGCTCTATAAGTGGTTTCCCATTAAGTTAGTAGACAAGATCATCTTGCTTGCAACAAACTTAATCTTGGGCAACACCAATCACTACGGCATCAAGAGGCCCAAAACCGGCCCAATAGAGCTCAAACTCGCCACAGGGAAAACTCCAGTCCTGGATGTGGGTCAAGTTGCACAAATAAAATGTGGTAACATAAAGGTGATGGAGGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTATGGATGGAAAAGAAAAGGAATTCGATGCTATAATCTTGGCAACAGGATACAAGAGCAACGTGCCTACTTGGCTCAAGGGATGTGATTTTTTTACGAAAGATGGAATGCCGAAAACGCCCTTTCCTCATGGGTGGAAAGGAGAGCAGGGAATGTATACGGTGGGGTTCACAAGAAGAGGTCTTCACGGAACGTCGTGTGATGCAATCAAGATCGCTGAAGACATAGCTGAACAGTGGAGAACCGTAGAGGACAAGAGTCACTGCGATTCACATATCATCCTACTCAATAATTCATAG 1215 0.4519 MGRSCNKSQQQHVEGPIIIGAGPSGLAVAACLSEDKVPFVILERHNCIASLWQNKTYDRLKLHLPKQFCELPLKGFPHTFPKYPTKYQFISYMESYASHFNIHPIFNQTVKSAEFDKGSNVWVVRTEEFEYSSRWLVVATGENAEPVVPRIHGMELFGGAVAHTSVYKSGSEYRNKKVLVIGCGNSGMEVCLDLCRHNAKPYMVARNTVHVLPREMLGFSTFGIAMALYKWFPIKLVDKIILLATNLILGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKCGNIKVMEGVKEITRNGAKFMDGKEKEFDAIILATGYKSNVPTWLKGCDFFTKDGMPKTPFPHGWKGEQGMYTVGFTRRGLHGTSCDAIKIAEDIAEQWRTVEDKSHCDSHIILLNNS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1040 404 Pfam Pyridine nucleotide-disulphide oxidoreductase 17 208 - -
Gso14g1040 404 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 10 395 - -
Gso14g1040 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Gso14g1040 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 134 142 - -
Gso14g1040 404 PRINTS Pyridine nucleotide disulphide reductase class-II signature 173 197 - -
Gso14g1040 404 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 395 - -
Gso14g1040 404 SUPERFAMILY FAD/NAD(P)-binding domain 176 386 IPR036188 -
Gso14g1040 404 Gene3D - 5 387 IPR036188 -
Gso14g1040 404 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Gso14g1040 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Gso14g1040 404 PRINTS FAD-dependent pyridine nucleotide reductase signature 177 195 - -
Gso14g1040 404 SUPERFAMILY FAD/NAD(P)-binding domain 17 209 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1040 Gso-Chr14 17005376 17008431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1040 K11816 - gmx:100818280 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1040 14 17005376 17008431 Gso14g1040 14 17005376 17008431 ECH
Gso14g1040 14 17005376 17008431 Gso17g1746 17 33807054 33810026 GST
Gso14g1040 14 17005376 17008431 Gso4g0604 4 5827326 5830362 PCT
Gso14g1040 14 17005376 17008431 Gso6g0604 6 5567341 5570156 PCT
Gso4g0604 4 5827326 5830362 Gso14g1040 14 17005376 17008431 PCT
Gso6g0604 6 5567341 5570156 Gso14g1040 14 17005376 17008431 PCT