Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0515 ATGATGCTTCGATTCCTAGTGCTGCTTCTTACGTTGGCAAGTTGTAGGGAGAGTAACAAAATGGCGAAAGCAGAGTATAACTATACGGTTGATTCGGCGAGAGCGTCTTTGGTTAGACAAGAGGACACCATCATTTTTGGTTTGATTGAGAGAGCCAGGTTCCCCTTAAATTCTCCAACCTACAATCAAAGTTACGCTTCCATTCCTCAATTTCGTGGCACATTGCTCGATTTTCTCGTTCGTGACACGGAGGTCATTCAAGCTAAGGCTGGAAGATACACTAACCTTGAAGAAAATCCTTTCTTCCCAGAAAATTTACCACCTTCGGTTGAGCCACATTACCCCTTCTCACAGTTTTTGCATCCTTCAGCCGCTATGATCAACATAAACAATGTCATTTGGAAACTGTACATTGATGAGCTGCTTCCAATATTTGTTGCTTCTGGTGATGATGGAAACTATGCACAAACTGCTGCTACCGATCTTTCATTGTTGCAGGCAATCTCTAGAAGGATTCATTACGGAAAGTTTATTGCCGAGGCCAAATTCAGAGAATCTCCTAAAGGCTATGAGCCTTTAATTCGTGCTAAGGACAAAGAAGCATTGATGAAATTATTGACAATTGAGAGCGTTGAAGAGATGGTGGTGAAGAGGGTTAAAAAGAAGGCCATGGTGTTAGGGCAGGAAGTGAGCCTTGATCGTAATGTCAAGGGAATAAAATACAAGGTTGATCCATCAGTAGTTTCTTTCTTGTACCAGAAATGGTTAATACCCCTCACAAAAAACGTTGAAGTCGAATACTTATTAAGCCGCTTAGACTGA 822 0.4161 MMLRFLVLLLTLASCRESNKMAKAEYNYTVDSARASLVRQEDTIIFGLIERARFPLNSPTYNQSYASIPQFRGTLLDFLVRDTEVIQAKAGRYTNLEENPFFPENLPPSVEPHYPFSQFLHPSAAMININNVIWKLYIDELLPIFVASGDDGNYAQTAATDLSLLQAISRRIHYGKFIAEAKFRESPKGYEPLIRAKDKEALMKLLTIESVEEMVVKRVKKKAMVLGQEVSLDRNVKGIKYKVDPSVVSFLYQKWLIPLTKNVEVEYLLSRLD* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0515 273 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Gso6g0515 273 PIRSF Chor_mut_AroQ_eu 16 273 IPR008238 GO:0004106|GO:0009073
Gso6g0515 273 PANTHER CHORISMATE MUTASE 1 273 - -
Gso6g0515 273 ProSiteProfiles Chorismate mutase domain profile. 21 273 IPR008238 GO:0004106|GO:0009073
Gso6g0515 273 PANTHER CHORISMATE MUTASE 1 273 IPR008238 GO:0004106|GO:0009073
Gso6g0515 273 TIGRFAM CM_pl-yst: chorismate mutase 30 273 IPR008238 GO:0004106|GO:0009073
Gso6g0515 273 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 273 IPR037039 GO:0004106|GO:0009073
Gso6g0515 273 SUPERFAMILY Chorismate mutase II 21 273 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0515 Gso-Chr6 4699393 4701643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0515 K01850 - gmx:100779968 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0520 4 4959305 4961763 Gso6g0515 6 4699393 4701643 GST
Gso14g0895 14 10553346 10556493 Gso6g0515 6 4699393 4701643 PCT
Gso17g1886 17 37749660 37752977 Gso6g0515 6 4699393 4701643 PCT
Gso6g0515 6 4699393 4701643 Gso14g0895 14 10553346 10556493 PCT
Gso6g0515 6 4699393 4701643 Gso17g1886 17 37749660 37752977 PCT