Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0520 ATGATGCTTCGATTCCTAGTGCTGTTTCTTACGTTGGCAAGTTGTAGGGAGAGTTACAAAATGGCGAAAGCAGAGTATAACTATACGGTAGATTCAGCGAGAGCGTCTTTGGTTAGACAAGAAGACACCATCATATTTGGTTTGATCGAGAGAGCAAGGTTCCCCTTAAATTCTCCAACCTACAATCAAAGTTACACTTCCATTCCCCAATTTCGTGGCACATTGCTCGATTTTCTCGTTCGCCACACCGAGGCCATTCAAGCTAAGGCAGGAAGGTACATTAACCCTGAAGAAAATCCTTTCTTCCCAGAAAATTTACCACCTTCGGTTGTGCCACGTTACCCCTTCTCACAGTTTTTGCATCCTGCAGCCGCTCTGATCAACATAAACAATGCCATATGGAAACTGTACTTTGATGAGCTGCTTCCAATGTTTGTTGCTTCTGGTGATGATGGTAACTATGCGCAAACTGCTGCTACTGATCTTTCATTGTTGCAGGCCATCTCTAGAAGGATTCATTACGGAAAGTTTGTTGGTGAGGCTAAATTCAGAGAATCTCCTCAAGGCTATGAGCCTTTAATTCGTGCTAAGGACAAAGGAGCATTGATGAAATTGTTAACATATGAGAGCGTTGAAGAGATGGTGGTGAAGAGGGTTAAAAAGAAGGCCATGGTGTTTGGGCAGGAAGTGAGCCTTGATCGTGATGTCAAGGGAATAACATACAAGGTTGATCCATCAGTAGTTTCTCTCTTGTACCAGAAATGGTTAATACCCCTCACAAAAAATGTTGAAGTCGAGTACTTACTAAACCGCTTAGACTGA 822 0.4282 MMLRFLVLFLTLASCRESYKMAKAEYNYTVDSARASLVRQEDTIIFGLIERARFPLNSPTYNQSYTSIPQFRGTLLDFLVRHTEAIQAKAGRYINPEENPFFPENLPPSVVPRYPFSQFLHPAAALININNAIWKLYFDELLPMFVASGDDGNYAQTAATDLSLLQAISRRIHYGKFVGEAKFRESPQGYEPLIRAKDKGALMKLLTYESVEEMVVKRVKKKAMVFGQEVSLDRDVKGITYKVDPSVVSLLYQKWLIPLTKNVEVEYLLNRLD* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0520 273 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Gso4g0520 273 SUPERFAMILY Chorismate mutase II 21 273 IPR036263 GO:0046417
Gso4g0520 273 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 273 IPR037039 GO:0004106|GO:0009073
Gso4g0520 273 TIGRFAM CM_pl-yst: chorismate mutase 30 273 IPR008238 GO:0004106|GO:0009073
Gso4g0520 273 PANTHER CHORISMATE MUTASE 1 273 - -
Gso4g0520 273 PANTHER CHORISMATE MUTASE 1 273 IPR008238 GO:0004106|GO:0009073
Gso4g0520 273 PIRSF Chor_mut_AroQ_eu 17 273 IPR008238 GO:0004106|GO:0009073
Gso4g0520 273 ProSiteProfiles Chorismate mutase domain profile. 21 273 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0520 Gso-Chr4 4959305 4961763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0520 K01850 - gmx:100791095 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0520 4 4959305 4961763 Gso6g0515 6 4699393 4701643 GST
Gso14g0895 14 10553346 10556493 Gso4g0520 4 4959305 4961763 PCT
Gso17g1886 17 37749660 37752977 Gso4g0520 4 4959305 4961763 PCT
Gso4g0520 4 4959305 4961763 Gso14g0895 14 10553346 10556493 PCT
Gso4g0520 4 4959305 4961763 Gso17g1886 17 37749660 37752977 PCT