Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0895 ATGATGATGATTCGATTTCCATTGGTGGTTCTTGTGTTGATGATTTGTGCCATGAGATGCAGAATGGCCAAAGCAGCAGAACAAAGTCCTGATTCTGGGAATGTGTACACGCTAGCTTCTGTGAGAGAGGATTTGGTTAGGCAAGAGGATACCATCATTTATGGTCTCATTGAGAGAGCCAAGTTCCCTAGCAATTCTCACACCTATGATGAAAAGTATGCTCAAATCCAGGGTTTTTGTGGCTCATTGGTGGAATTTGTTGTTAAGAATACAGAGGCCATTCAAGCTAAGGCTGGAAGATACAAAAACCCTGAAGAAAACGCCTTCTTCCCAGAAAATTTACCACCATCAATTGTGCCATCTTACTCCTTCAAACAGTTTTTGCATCCTGGTGCTGCTTCAATTAACATAAACAAGTCCATCTGGAAAATGTATTTCAAAGAGTTACTTCCATTGCTTGCTACTTCGGGTGATGATGGCAACTATGCGCAAACTGCAGCTAATGACCTTTCATTATTGCAGTCCATCTCTAGAAGGATTCACTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATGCTCCTCAAGACTACGAGCCTTTAATTCGAGCTAAGGATAAAGAAGGATTGATGAAATTGTTGACATTTACAAGCGTTGAAGAGACGGTGAGGAAGAGAGTTGAAAAGAAGGCTGTGGTGTTTGGGCAGGAAGTGAATCTTAACAGTGATGACAATGACAATGAAAACCGTAAATTTGATCCATCAGTGGCTTCTAGCTTGTACAAAAATTGGGTGATACCTCTCACCAAGGAGGTTCAGGTTGAGTACCTCTTGCGCCGTCTAGACTGA 849 0.4181 MMMIRFPLVVLVLMICAMRCRMAKAAEQSPDSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNSHTYDEKYAQIQGFCGSLVEFVVKNTEAIQAKAGRYKNPEENAFFPENLPPSIVPSYSFKQFLHPGAASININKSIWKMYFKELLPLLATSGDDGNYAQTAANDLSLLQSISRRIHYGKFVAEVKFRDAPQDYEPLIRAKDKEGLMKLLTFTSVEETVRKRVEKKAVVFGQEVNLNSDDNDNENRKFDPSVASSLYKNWVIPLTKEVQVEYLLRRLD* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0895 282 PIRSF Chor_mut_AroQ_eu 24 282 IPR008238 GO:0004106|GO:0009073
Gso14g0895 282 TIGRFAM CM_pl-yst: chorismate mutase 37 282 IPR008238 GO:0004106|GO:0009073
Gso14g0895 282 ProSiteProfiles Chorismate mutase domain profile. 29 282 IPR008238 GO:0004106|GO:0009073
Gso14g0895 282 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 30 282 IPR037039 GO:0004106|GO:0009073
Gso14g0895 282 PANTHER CHORISMATE MUTASE 8 282 IPR008238 GO:0004106|GO:0009073
Gso14g0895 282 PANTHER CHORISMATE MUTASE 8 282 - -
Gso14g0895 282 SUPERFAMILY Chorismate mutase II 32 282 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0895 Gso-Chr14 10553346 10556493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0895 K01850 - gmx:100791341 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0895 14 10553346 10556493 Gso14g0895 14 10553346 10556493 ECH
Gso14g0895 14 10553346 10556493 Gso17g1886 17 37749660 37752977 GST
Gso14g0895 14 10553346 10556493 Gso4g0520 4 4959305 4961763 PCT
Gso14g0895 14 10553346 10556493 Gso6g0515 6 4699393 4701643 PCT
Gso4g0520 4 4959305 4961763 Gso14g0895 14 10553346 10556493 PCT
Gso6g0515 6 4699393 4701643 Gso14g0895 14 10553346 10556493 PCT