Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0612 ATGAAAACAAGGAGAGGAAAACGCTCAGAGGCCTTTTGGCCTTCCCTTGTGATGAAGAAATGGTTGAACATAAAGCCAAAGGTGTATGATTTTAGTGAAGATGAAGTAGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAAAGATTCAATACTGGGTGTGCGTGAAGATAATCCACTTAGAACACAATCCATATTCCCAAGTCAAACATCAGATGCACCTTGTAAGGGCTACAAGACAAGACATAAAAGAGGGAAATCAGAAACTCTTCGTGTTCAATACATAAATACAAAGGAAGTGAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGAGCTCCAAGTAAGGATCTTGATATTGAGGACTGGCTTTGTACCAATGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTTGTCCCCCTGAGTGCTGGAAATGTTCTGGGGGCAGAGGATAACACACCCATCCGAAAATGGGAAGCAATCATCCGAAGAACTCTAAACAAATCTTCTGAACCTGAAAGCAAGCACAAAAGCTACAGTGCCCCTCATTCTCCTGTTTTAAGAACTTCTGCTTCTGCTGATGTTCTAGCAGACAGTGTAGATGTTAATTCACTAGACATGATGAATGAGGAGTATCTAGGAACTTTTGACAGTGATGATCTAGAACAAGAGGAAGTGAAAAGCACATCTGGTATAGGAAAGAATTTACAGCTGAGGAAAAGACATGACATTGATCTTCAGACTATACTTGACTGGCCTGAACGTCCATTAGATGCAACTCCACATACTGATTCCAGTCCAAAATTGCGTAGAGTACTAAGCAGCTCAGACAGAACTGGCTTTAGCTGGACAGATAATGCTTCAAAATATGCTGGTGTAATGAAACGATCACACCATAGTTCTGGAAATTTGGGCTTGTTATGGAAAGAGCAGAAAGTGATGCCTGAAGAAGTAATTGATACTATTGACGACTTGTCTGATGTGCTATTGGACGAGGAAGATGATGATTATTTTGAAGTGCCAAATGACAAAGAAGTTAATGGAATAGGTATGGTGAAATCTCATCGTAAGTATCTCCGGATTGTCAGCAAGCAGATGGTAGGAATATATGTGTCTGCTTGGGTGCAAAGGAGGTTGAGAAGGCACATTAATAACTTGAAAGTTTCTCCAGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGATCTGTTTCAGTTAGTATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATCTGACTTCTGGTCAGAAGGATGGAGCAGAAATAAGACGAAACTCAGATGTTCATGAAATTATTCGCCGCACTTGTTTCTCATCCGTCTTTGATACAGATCAACCACAAACAATCCCATCTCATGATCAAATTTTCTGGTTTGGGGATTTGAATTATCGTATCAATATGATGGATGAAGAGGTTCGAAAGCTGGTAGCTCTAAAGAAATGGGATGAACTTATGAATTGCGATCAGCTAAGTAATGAATTACGTAGTGGTCATGTGTTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAATTTAATTCTGATACATACATCGGTGAGAACCAAAAAGAAGGGGAAAAGAGGAGATCTCCAGCCTGGTGTGATCGTATATTATGGCTAGGAAAAGGAATAAAGCAACTTGAATACAGGCGTTCAGAAAATAAGCTCTCAGATCATCGACCAGTTAGTTCAATATTCTCGGTTGATGTTGAAGTATTTGATCACCGGAAACTGCAACGAGCATTGAATTTCACAAATGCAGCAGTACACCATGAGATTTTCCTTAAAGAAGATAGCGACTGGTCATATTAG 1875 0.4032 MKTRRGKRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDACSLKDSILGVREDNPLRTQSIFPSQTSDAPCKGYKTRHKRGKSETLRVQYINTKEVRVTIGTWNVAGRAPSKDLDIEDWLCTNEPADIYIIGFQEVVPLSAGNVLGAEDNTPIRKWEAIIRRTLNKSSEPESKHKSYSAPHSPVLRTSASADVLADSVDVNSLDMMNEEYLGTFDSDDLEQEEVKSTSGIGKNLQLRKRHDIDLQTILDWPERPLDATPHTDSSPKLRRVLSSSDRTGFSWTDNASKYAGVMKRSHHSSGNLGLLWKEQKVMPEEVIDTIDDLSDVLLDEEDDDYFEVPNDKEVNGIGMVKSHRKYLRIVSKQMVGIYVSAWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEIRRNSDVHEIIRRTCFSSVFDTDQPQTIPSHDQIFWFGDLNYRINMMDEEVRKLVALKKWDELMNCDQLSNELRSGHVFDGWKEGLINFPPTYKYEFNSDTYIGENQKEGEKRRSPAWCDRILWLGKGIKQLEYRRSENKLSDHRPVSSIFSVDVEVFDHRKLQRALNFTNAAVHHEIFLKEDSDWSY* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0612 624 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 618 IPR045849 GO:0004445|GO:0046855
Gso5g0612 624 SUPERFAMILY DNase I-like 94 607 IPR036691 -
Gso5g0612 624 Gene3D Endonuclease/exonuclease/phosphatase 327 617 IPR036691 -
Gso5g0612 624 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 618 - -
Gso5g0612 624 SMART i5p_5 285 595 IPR000300 GO:0016791|GO:0046856
Gso5g0612 624 Gene3D Endonuclease/exonuclease/phosphatase 83 193 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0612 Gso-Chr5 7359264 7366001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0612 362 560 Acyl Lipid Metabolism Gene Families AT2G31830 34.513 9.42e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0612 K24221 - gmx:100807214 1246.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0612 5 7359264 7366001 Gso17g1292 17 12804278 12810560 GST
Gso1g1718 1 53936553 53942706 Gso5g0612 5 7359264 7366001 PCT
Gso11g0359 11 3074748 3080643 Gso5g0612 5 7359264 7366001 PCT
Gso5g0612 5 7359264 7366001 Gso1g1718 1 53936553 53942706 PCT
Gso5g0612 5 7359264 7366001 Gso11g0359 11 3074748 3080643 PCT