Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1718 ATGAAAATTGCGACGTGGTGTGAGGACCAGCAGTATAATTTTCCTTCAGCAAAGCAAGTTGCGGTTGTGGATGTGTTGCTGAGATGTTCAGACATTTTCTGTCCTTTTCTGGTTGGTTCTAATAGGGATCTTCCTCCTCATCGACATTCAATTAATTCCAATTTTTGTATTTGGACCCATCAAACAATGAAGGCAAGGAGAGGAAAACGCTCAGAGGCTTTCTGGCCTTCCATTGTGATGAAAAAATGGTTAAACATCAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTGGACACTGAAACTGAAAGTGAAGATGATGCTTGTTCAATTAGAGGCTCAAGAATGTGTGTGCGTGAAGATAATCCACATCCACTTAGAACAGAAGGGGTTCAATCCATATTCCCAAGTGTAACATCAGATGCATCTCCTTGTAAGGGCCGCAAGACAAGACACAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAACACGAAGGAAATGAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGACATCCATGTGAGGATCTTGAGATTGATGACTGGCTTTGTACCGAAGACCCAGCTGATATTTACATTATTGGTTTCCAGGAGGTAGTTCCATTGAATGCTGGAAATGTGTTAGGAGCAGAAGATAATACACCTATCCCAAAATGGGAGGCAATCATTCGAAGATCTCTAAACAAATCTTCTGAGCCTGACAGTAAACATAAAAGCTACAGTGCCCCCCCTTCTCCAGTGTTAAGAACTTCTTCTGCTGCTGATCTTCTTGCAGATACTATAGATGCTGATAATCCAATTCCAATAGATATGATGATTGAGGAGTATGTAGCAACAGTTGATAATAATGAGATGGAACAGCAGGAAGTGAAAAGCATAATTGATATAGAGAATAACCTACAGTTGAGGAGAATATATGGAATTGATATTGACTGGCCTGAACATTCATTAGATGCAGTCCCCCAAATTGTTGATTCCAATTCAAAGTTGCGGAGAGTACTAAGCAGCTCAGCCAGAATTGGATTTAGCAGAGCTGAGAGTGGTTTGGTATATGGTGTTGGATTGAAACGTTCACACCACAGTTCTGGAAATTTGGGCTTGTTATGGCAACAACAACAAGGGATACCTGAAGTAGTTGATTCCTTAGAAGATGTCTCTGATGTGCTATCAGCTGAGGATGGTGATACTTTTATTGTACCAAATAACGAAGATGATGATGAATTTGGTACCACAGAATCTTGTCCAAGTCCAAGGTATGTCCGGATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTTCAGAGGAGGTTGAGAAGGCACATTAACAATTTGAAAGTTTCCCCGGTTGGAGTTGGACTTATGGGCTACATGGGAAACAAGGGGTCAGTTTCCATTAGTATGTCTCTCTTTCAGTCACGTATGTGCTTTGTTTGTTCCCATTTGACTTCTGGTCAGAAGGAAGGGGCTGAACATAGGCGAAACTCTGATGTTCATGAAATTCTAAGACGCACTTGCTTCTCATCATCTGTCTTCGATGCAGATCAACCACAAACAATCCCATCTCATGACCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCTGAGGTTAGAAAATTGGTTGCTCTAAAGAAGTGGGATGAGTTGAAGAATTATGATCAGCTAAGCAAAGAATTGCGTATGGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAAATTAACTCTGATAGATATGTTGGTGAGAGGCCAAAAGAAGGGGAAAAAAGAAGATCTCCAGCCTGGTGTGATCGTATATTGTGGCTAGGCAAAGGAATAAAACAACTACAATATGGACGTGCAGAAATTAAGCTCTCGGATCATAGACCAGTTAGTTCAGCCTTCTTGGTTGAAGTTGAAGTATTCGACCATCGCAAGCTAAAGAGAGCTCTAAATTTCACTAGGGCAGCAGTACACCCAGAGATCTTCCTTGATGAAGATGGAGAAATATAA 2076 0.4104 MKIATWCEDQQYNFPSAKQVAVVDVLLRCSDIFCPFLVGSNRDLPPHRHSINSNFCIWTHQTMKARRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSIRGSRMCVREDNPHPLRTEGVQSIFPSVTSDASPCKGRKTRHRRGKSETLRAQYINTKEMRVTIGTWNVAGRHPCEDLEIDDWLCTEDPADIYIIGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRSLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTIDADNPIPIDMMIEEYVATVDNNEMEQQEVKSIIDIENNLQLRRIYGIDIDWPEHSLDAVPQIVDSNSKLRRVLSSSARIGFSRAESGLVYGVGLKRSHHSSGNLGLLWQQQQGIPEVVDSLEDVSDVLSAEDGDTFIVPNNEDDDEFGTTESCPSPRYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGQKEGAEHRRNSDVHEILRRTCFSSSVFDADQPQTIPSHDQIFWFGDLNYRINMLDAEVRKLVALKKWDELKNYDQLSKELRMGHVFDGWKEGLINFPPTYKYEINSDRYVGERPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPVSSAFLVEVEVFDHRKLKRALNFTRAAVHPEIFLDEDGEI* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1718 691 Gene3D Endonuclease/exonuclease/phosphatase 394 682 IPR036691 -
Gso1g1718 691 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 68 687 IPR045849 GO:0004445|GO:0046855
Gso1g1718 691 SMART i5p_5 355 664 IPR000300 GO:0016791|GO:0046856
Gso1g1718 691 Gene3D Endonuclease/exonuclease/phosphatase 150 254 IPR036691 -
Gso1g1718 691 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 68 687 - -
Gso1g1718 691 SUPERFAMILY DNase I-like 161 676 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1718 Gso-Chr1 53936553 53942706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1718 430 629 Acyl Lipid Metabolism Gene Families AT1G05630 34.513 7.38e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1718 K24221 - gsj:114422956 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1718 1 53936553 53942706 Gso11g0359 11 3074748 3080643 GST
Gso1g1718 1 53936553 53942706 Gso5g0612 5 7359264 7366001 PCT
Gso1g1718 1 53936553 53942706 Gso17g1292 17 12804278 12810560 PCT
Gso5g0612 5 7359264 7366001 Gso1g1718 1 53936553 53942706 PCT
Gso17g1292 17 12804278 12810560 Gso1g1718 1 53936553 53942706 PCT