Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0359 ATGAAAGCAAGGAGAGGAAAACGCTCAGAGGCTTTCTGGCCTTCCATTGTGATGAAAAAATGGTTAAACATCAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTTGACACTGAAACTGAAAGTGAAGATGATGCTTGCTCAATTAGAGGCTCAAGAATGTGTGTGCGTGAAGATAATCCACATCCACTTAGAACAGAAGGGGTTCAATCCATATTCTCAAGTCTAACATCAGATGCATCATCTCCTTGTAAAGGCCGCAAGACAAGACATAGAAGAGGAAAGTCAGAAACTCTGCGTGCTCAGTACATAAACACGAAGGACGTGAGGGTAACTATTGGCTCTTGGAATGTTGCTGGAAGACATCCATGTGAGGATCTTGAGATGGATGACTGGCTATGTACGGAAGACCCAGCTGATATTTACATTATTGGTTTCCAGGAGGTAGTTCCATTGAATGCTGGAAATGTGCTAGGAGCAGAAGATAATACACCTATCCCAAAATGGGAGGCAATCATTCGAAGATGTCTAAACAAATCTTCTGAGCCTGACAGTAAACACAAAAGCTACAGTGCCCCTCCTTCTCCAGTGTTAAGAACCTCTTCTGCTGCTGATCTTCTAGCAGACACAATAGATGCTGATAATCCAATTCCAATAGATATGACGATTGAGGAGTATGTAGCAACAGTTGATAATAATGAGGTGGAGCAGCAGGAAGTGAAAAGCATAATTGACATAGAGAATAACTTACAGTTGAGGAGAGTATTTGGCATTGATATTGACTGGCCTGAACGTTCCTTAGATGCAATCCCCCAAATTGTTGATTCCAATTCAAAGTTGCGGAGAGTACTAAGCAGCTCAGCCAGAATTGGCTTTAACAGGACTGAGAGTAGTTTGGTATATGGTGTTGGATTGAAACGTTCACACCGCAGTTCTGGAAATTTGGGCTTGTTATGGCAACAACAACAAGTGATACCTGAAGTCGTTGATTCCTTAGAAGATGTCTCTGATGTGTTATCAGCTGAGGGTGGTGATACTTTTATTGTACCGAATGACGAAGATGAAGATGAATTTGGTACCACAGAATCTTGTCCAAGTACAAGGTATGTCCGAATTGTGAGCAAGCAAATGGTAGGGATATATGTATCTGTTTGGGTTCAGAGGAGGTTGAGAAGGCACATTAATAATTTAAAAGTTTCCCCGGTTGGAGTTGGACTTATGGGCTACATGGGAAACAAGGGGTCAGTTTCGATTAGTATGTCTCTCTTTCAGTCACGTATGTGCTTTGTTTGTTCCCATTTGACTTCTGGTCAGAAGGAAGGGGCTGAACATAGGCGAAACTCTGATGTTCATGAAATTCTAAGACGCACTTGCTTCTCATCATCTGTATTTGACGCAGATCAACCACAAACAATACCATCTCATGACCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAATATGTTGGATGCTGAGGTTAGAAAATTGGTGGCTCTAAGGAAGTGGGATGAGTTGAAGAATTATGATCAGCTAAGCAAAGAATTGCGTATGGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAATTTAACTCTGATAGATATGTCGGTGAGAGCCCAAAAGAAGGGGAAAAAAGAAGATCTCCAGCCTGGTGCGATCGTATATTGTGGCTAGGAAAAGGAATAAAACAATTACAATATGGACGTGCAGAAATTAAGCTCTCAGATCATAGACCAGTTAGTTCAGCCTTCTTGGTTGAAGTTGAAGTATTCGATCATCGCAAACTAAAAAGAGCTCTAAATTTCACTAGGGCAGCAGTACACCCAGAGATCTTCCTTGATGAAGACGGCGAAATATAA 1893 0.4136 MKARRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSIRGSRMCVREDNPHPLRTEGVQSIFSSLTSDASSPCKGRKTRHRRGKSETLRAQYINTKDVRVTIGSWNVAGRHPCEDLEMDDWLCTEDPADIYIIGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRCLNKSSEPDSKHKSYSAPPSPVLRTSSAADLLADTIDADNPIPIDMTIEEYVATVDNNEVEQQEVKSIIDIENNLQLRRVFGIDIDWPERSLDAIPQIVDSNSKLRRVLSSSARIGFNRTESSLVYGVGLKRSHRSSGNLGLLWQQQQVIPEVVDSLEDVSDVLSAEGGDTFIVPNDEDEDEFGTTESCPSTRYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGQKEGAEHRRNSDVHEILRRTCFSSSVFDADQPQTIPSHDQIFWFGDLNYRINMLDAEVRKLVALRKWDELKNYDQLSKELRMGHVFDGWKEGLINFPPTYKYEFNSDRYVGESPKEGEKRRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPVSSAFLVEVEVFDHRKLKRALNFTRAAVHPEIFLDEDGEI* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0359 630 Gene3D Endonuclease/exonuclease/phosphatase 89 193 IPR036691 -
Gso11g0359 630 Gene3D Endonuclease/exonuclease/phosphatase 328 621 IPR036691 -
Gso11g0359 630 SUPERFAMILY DNase I-like 100 615 IPR036691 -
Gso11g0359 630 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 626 IPR045849 GO:0004445|GO:0046855
Gso11g0359 630 SMART i5p_5 292 603 IPR000300 GO:0016791|GO:0046856
Gso11g0359 630 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0359 Gso-Chr11 3074748 3080643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0359 369 568 Acyl Lipid Metabolism Gene Families AT1G05630 34.956 1.83e-35 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0359 K24221 - gmx:100785439 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1718 1 53936553 53942706 Gso11g0359 11 3074748 3080643 GST
Gso11g0359 11 3074748 3080643 Gso5g0612 5 7359264 7366001 PCT
Gso11g0359 11 3074748 3080643 Gso17g1292 17 12804278 12810560 PCT
Gso5g0612 5 7359264 7366001 Gso11g0359 11 3074748 3080643 PCT
Gso17g1292 17 12804278 12810560 Gso11g0359 11 3074748 3080643 PCT