Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0272 ATGTCGTCTTCACCGCAGAACATAAAACAGAGAGTCTTCACATGCCTGACAAAACTCTCTGACCGCGACACGCAGTCCCTCGCCGCCGCGGAACTCGAGTCCATCGCTCGTAACCTCGACGCAACCACCTTGCCGGCGTTCCTCTCGTGCATGTACTCCACCGATGCCTCCGACAAACCACCGGTGCGCAAGCAGTGCGTACACCTGCTAGGGTTCCTCGCGCAGACGCACGGCAACATGCTCGCGCCGTACCTGTCGAAGATCCTCGGCAGCGTCGTGCGGCGGCTCCGTGACGTGGACTCGTCGGTGCGATCCGCGTGCGTGAATTCCATTGCGGCATTGTCGGGCCACGTCAGCAAGCAACCGCTGAATTCGTTTCTGAAGCCGTTGGCGGAGGCGCTGTTCACGGAGCAGGACCAGAACGCGCAGGCCAGCGCGGCGCTGTGTCTCGCCTCTGCGATCGACGGAGCTCCGGATCCTGACCCGGCCAGGCTGGCGAAGCTCCTGCCGAGGTTCGAGAAGCTTCTGAAGCGCGACGGTTTCAAGGCGAAGCCAGCGCTGTTGACGCTCGTCGGAAGCGTCGTCGCCGCCGGCGGCGCGTCCGGCCACGCTCAGTTAAAGAGTTTGGTTCCCTGCTTGGTGGAGGCGTTGAGCAACGACGATTGGGCCACGCGGAAGGCCGCGGCGGAGACGCTCGTGGTGGTTGCTGACGTGGAGAGGGATTTCTTATCGGAGTTTAAGGGTGAGTGTGTGAGAGTTTTCGAGAATCGACGGTTTGATAAGGTGAAGTTAGTTCGGGACGTTATGAATCAGATGTTGGAAGCGTGGAAGCTAGTTCCTGATGTTTCGGATGAAGTTTCTCCACCTCCTAAATCGCAATCTTCATCCAAAGAGAATGCAAGTGATGGGCGCTATCCTCAGGTCTCTCAAAATTCATGTAGTCCTCGTTCAATGATGGCCAATTTGAGGAGGAAATCTACTCCTTTTAGCAGATTCAGTCCAGCAGATAGTTCTTCTGCTAGCAATGCTAAGAATACGAGTGCTTCAAGTAGTAACAAGAGAATGAGTTCATCTGTTTCCCGAAAATTGAACCATAAGAATTGGGATGCTCAAATTGCCGTGGCTGATCAGGGAGATCTTCAGGAGAGGGATGGAATTGTTTCGGAAAGGAGCAAAATGGATAAAAGCGGAGTTTCAAAGCCAGAAACGAAAAGGGCACTGCTAAACAAAAGTTCTGAGGATAAAATACAAAAGTATGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCATATCAAGAAGATGAGAGCCAAGACTCAGTTCCTGTCAGTATCGTCTCTAAAGATCTCCAAAGGAATGACAAAGAGAGTGAAGATTTATCGCTGATCCGTGATCAGTTACATCAGATTGAGAACCAGCAGTCAAGTCTACTTGATCTTCTGCAGAAATTCATGGGAAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCAAGTGGAAGGATGACTAAACCTGATCCTCATGGTAACACATGTTGCATGCTACCTGGAGCAGAATTTTTGAGCTCCAAATTCTGGAGGAAAACACATGGCCGGGATTCAATCACCCGATTCTCTAGATCAGGTGGCACCCCATCACTTGCTGCCATGAACTACCAAGCCAACAGGGATGCTGAAACCAAGTTGGCAAACCACAGATTCAGGCCTGATGGAGGCTTCATCACTAATCCGCTGGCAGAGATTCATACAAACTCGAGGAATTTTGCAACATCGGAGATAGCTTAA 1836 0.5147 MSSSPQNIKQRVFTCLTKLSDRDTQSLAAAELESIARNLDATTLPAFLSCMYSTDASDKPPVRKQCVHLLGFLAQTHGNMLAPYLSKILGSVVRRLRDVDSSVRSACVNSIAALSGHVSKQPLNSFLKPLAEALFTEQDQNAQASAALCLASAIDGAPDPDPARLAKLLPRFEKLLKRDGFKAKPALLTLVGSVVAAGGASGHAQLKSLVPCLVEALSNDDWATRKAAAETLVVVADVERDFLSEFKGECVRVFENRRFDKVKLVRDVMNQMLEAWKLVPDVSDEVSPPPKSQSSSKENASDGRYPQVSQNSCSPRSMMANLRRKSTPFSRFSPADSSSASNAKNTSASSSNKRMSSSVSRKLNHKNWDAQIAVADQGDLQERDGIVSERSKMDKSGVSKPETKRALLNKSSEDKIQKYGGSKAGSRVVPYQEDESQDSVPVSIVSKDLQRNDKESEDLSLIRDQLHQIENQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKPDPHGNTCCMLPGAEFLSSKFWRKTHGRDSITRFSRSGGTPSLAAMNYQANRDAETKLANHRFRPDGGFITNPLAEIHTNSRNFATSEIA* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0272 611 Gene3D - 3 376 IPR011989 -
Gso5g0272 611 MobiDBLite consensus disorder prediction 380 406 - -
Gso5g0272 611 MobiDBLite consensus disorder prediction 282 364 - -
Gso5g0272 611 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 5 606 - -
Gso5g0272 611 SUPERFAMILY ARM repeat 4 258 IPR016024 -
Gso5g0272 611 MobiDBLite consensus disorder prediction 419 440 - -
Gso5g0272 611 Coils Coil 452 472 - -
Gso5g0272 611 MobiDBLite consensus disorder prediction 382 406 - -
Gso5g0272 611 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 606 IPR033337 GO:0005874|GO:0008017
Gso5g0272 611 Pfam HEAT repeat 209 237 IPR000357 GO:0005515
Gso5g0272 611 MobiDBLite consensus disorder prediction 287 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0272 Gso-Chr5 2845518 2848974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0272 - - gmx:100789197 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0272 5 2845518 2848974 Gso17g0792 17 7369560 7372983 GST
Gso5g0272 5 2845518 2848974 Gso4g1486 4 43587276 43593003 PCT
Gso5g0272 5 2845518 2848974 Gso6g1578 6 16375927 16380755 PCT
Gso4g1486 4 43587276 43593003 Gso5g0272 5 2845518 2848974 PCT
Gso6g1578 6 16375927 16380755 Gso5g0272 5 2845518 2848974 PCT