Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0792 ATGTCGTCGACACCGCAGAGCTTAAAGCAGAGAGTCTTCAGATGCCTAACCAAACTCTCCGACCGCGACACGCAGTCTCTCGCCGCTGCGGAGCTCGAGTCAATCGCTCGAAACCTCGACGGAGCCACCTTGCCGATGTTCCTCTCGTGCATGTACTCCACCGACGACTCCGACAAGCCACCGGTGCGCAAGCAATGCGTTCAGCTCCTAGGGTTCCTCGCGGAGACGCACGGCAACATGCTCGCGCCGTACCTGCCAAAGATCCTCGGCAGCGTCGTGCGAAGGCTCCGCGATGCGGACTCGTCGGTCCGATCGGCGTGCGTGAATTCCATTGCGGCATTGTCACGCCACGTCAGCAAGCCGCCGCTGAATGCGTTTCTGAAGCCGTTGGCGGAGGCGCTTTTCACAGAGCAGGACCAGAACGCGCAGGCCAGCGCGGCGATGTGCCTCGCCGCCGCGATCGACGGAGCTCCGGATCCGGACCCGGCTAGGCTGGCGAAGCTCCTGCCGAGGTTCGAGAAGCTTCTAAAGCGCGACGGTTTCAAGGCGAAGCCCGCGCTGTTGACGCTTGTCGGAAGCGTCGTCGCCGCCGGCGGCGCTTCCGGCCACGTGCCGCTGAATAGTTTGGTTCCGTGCTTGGTGGAAGCGTTGAGCAGCGATGACTGGGCGACGCGTAAGGCCGCGGCGGAGACGCTCGTGGTGGTTGCCGACGTGGAGAGGGATTTCTTATCGGAGTTCAAGGCTGAGTGTGTTAGAGTTTTCGAGAATCGACGGTTTGATAAGGTGAAATTAGTTCGGGACGTTATGAATCAGATGTTGGAAGCGTGGAAGCAGATTCCTGATGTTTCGGATGAAGTTTCGCCACCTCCTAAATCGCAATCTTCTTCCAAAGAGAATGCAAGTGATGGGCGCTATCCCCAAGTCTCTCACAATTCATGTAGTCCTCGTTCAATGATGGCCAATTTGCGGAGGAAATCTACTCCTTTCAGCAGATTCAGTCCAGCAGATAGTTCTTCTGCTAGCAATGCTAAGAATTCGAGTGCTTCAAGTAGTAACAAGAGAAGATTGTTTGTTTCACGGAAATTAAACCATATGAATTGGGATGCTCCAATTGCTATGGCTGATCAGGGAGATCTTCAGGAGAGGGATGGAATTGTTTTGGATAGGAGCAAAATGGATAAAAGCAGAGTTTCAAAGTCAGAAATGAAACGGGTACTGCTAACTAAAAGTTCTGAGGATAAAATGCAAAAGTATGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCATATCATGAAGATGAGAGTCAAGACTCAGTTCCTGTCAGTATTGTCTCTAAAGATCTCCAAAGGAATGACAAAGAGAGTGAAGATTTATCGCTGATCCGTGATCAGTTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTCGATCTTCTACAGAAATTCATGGGAAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCAAGTGGAAGGATGACTAAATCTGATGCTCAGGGTAACGCATGTTGCATGCTACCTGGAGCAGAATTTTTGAGCTCCAAATTCCGGAGGAAAACACATGGCCGGGATTCAATCGTGCGATTCTCTAGATCAGGTGGCACCCCATCACTTGCTGCCATGAACTACCCACCCAATAGGAATGCTGAAACTAAGTTGACAAACCACAGATTTAGGCCTGACGGAGGCTTCATCACTAATCCGCTTGCAGAGATTCATACGAATTCGAGGAATTTTGCGACATTGGAGATAGCTTAA 1833 0.5123 MSSTPQSLKQRVFRCLTKLSDRDTQSLAAAELESIARNLDGATLPMFLSCMYSTDDSDKPPVRKQCVQLLGFLAETHGNMLAPYLPKILGSVVRRLRDADSSVRSACVNSIAALSRHVSKPPLNAFLKPLAEALFTEQDQNAQASAAMCLAAAIDGAPDPDPARLAKLLPRFEKLLKRDGFKAKPALLTLVGSVVAAGGASGHVPLNSLVPCLVEALSSDDWATRKAAAETLVVVADVERDFLSEFKAECVRVFENRRFDKVKLVRDVMNQMLEAWKQIPDVSDEVSPPPKSQSSSKENASDGRYPQVSHNSCSPRSMMANLRRKSTPFSRFSPADSSSASNAKNSSASSSNKRRLFVSRKLNHMNWDAPIAMADQGDLQERDGIVLDRSKMDKSRVSKSEMKRVLLTKSSEDKMQKYGGSKAGSRVVPYHEDESQDSVPVSIVSKDLQRNDKESEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDAQGNACCMLPGAEFLSSKFRRKTHGRDSIVRFSRSGGTPSLAAMNYPPNRNAETKLTNHRFRPDGGFITNPLAEIHTNSRNFATLEIA* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0792 610 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 605 IPR033337 GO:0005874|GO:0008017
Gso17g0792 610 Coils Coil 451 471 - -
Gso17g0792 610 MobiDBLite consensus disorder prediction 415 439 - -
Gso17g0792 610 MobiDBLite consensus disorder prediction 280 353 - -
Gso17g0792 610 Gene3D - 3 348 IPR011989 -
Gso17g0792 610 SUPERFAMILY ARM repeat 8 271 IPR016024 -
Gso17g0792 610 Pfam HEAT repeat 209 237 IPR000357 GO:0005515
Gso17g0792 610 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 5 605 - -
Gso17g0792 610 MobiDBLite consensus disorder prediction 287 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0792 Gso-Chr17 7369560 7372983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0792 - - gmx:100796857 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0272 5 2845518 2848974 Gso17g0792 17 7369560 7372983 GST
Gso17g0792 17 7369560 7372983 Gso4g1486 4 43587276 43593003 PCT
Gso17g0792 17 7369560 7372983 Gso6g1578 6 16375927 16380755 PCT
Gso4g1486 4 43587276 43593003 Gso17g0792 17 7369560 7372983 PCT
Gso6g1578 6 16375927 16380755 Gso17g0792 17 7369560 7372983 PCT