Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0233 ATGGGTACTTTACAGTGCTTTTCGGTTGAAGGAGATGAAAAACCAAGAAAGTTATCCAAACTTTCAGATGATCCTCAGGAGGAGGAGGAGGGTATGCAGATTGATATGGTTTCTCTTTTCCCTTCCCAGCACCAAAGCAATGATCAAAACCATGCACCCATGGCAATTGAGGAGCGTGATCCAAGATGGCTTATTAACCAGGATGTCTCAATCGGTGTTGTCCTACGCTTGTCAAGGTCTGAGTATGGTTCAATTGTCTCACTGAACCAGAGTTTCCGGTCCCTGATTCAGACCGGAGAACTCTATCGGCTCAGAAGGAAAATGGGAATTGTAGAATACTGGGTTTACTTCTCTTTCAATCTTCTTGAATGGGAGGTGTTTGATCCAATGAATGGCTATTGGATGAAATTGCCTAGAATGCCTTCCAATCAGTATGACTGCTTCACGTTTTCGGATAAGGAGTCTTTGGCTGTTGGCACAGAACTTCTTGTGTTTGGAAAGGCAATAGAGGCTCCTGTTGTTTATGGATACAGCCTCTTGACCCACACTTGGTCACATGGTACTCAGATGAGTGTTCCTAGATGCTTGTTTGCATCTGCGAGCCGCGGAGAAATAGCCATAGTGGCTGGTGGGTGTAATCCACTAGGCAAGATCCTGAGTGTGGCTGAGATGTATAACTCAGACACCAAGACATGGGAGGCTCTCCCAAACATGAACAAAGCAAGGAAGATGAGTGCTGGTGTGTTCATGGATGGGAAATTTTATGCCCTTGGTGGAATGGGAGAAGATGGTAATAAGCTGACATGTGGTGAGGAGTATGATTTGGAGACAAAGGAATGGCGTGTGATCCCTAACATGCTCCCTCCGCGAACAAGCGAAAGACAAGACACTACTGAGGCACCACCTTTGGTTGCAGTTGTGAACAATGTGTTGTACGCTGCAGATTATGCTCAGAGGGTGCTGAGGCGGTATGAGAAAGAGAGGAACAAATGGGTCTACATTGGAAGTCTTCCTGAGATAACATCCTCTATGAATGGTTGGGGATTAGCATTTCGAGCATGTGGAGATCGAATAGTTGTTATTGCTGGGGAAAGTGCTCATGGTGGAAGGGTGGTTGAAATTAATTCTTGGATCCCAGATGGAGGTGCACCACTGTGGAACTTGCTTGCCAGAAGGCACATTGGTGGGAGCTTTGTGTATAATTGCGCAGTGATGGGATGCTGA 1224 0.4608 MGTLQCFSVEGDEKPRKLSKLSDDPQEEEEGMQIDMVSLFPSQHQSNDQNHAPMAIEERDPRWLINQDVSIGVVLRLSRSEYGSIVSLNQSFRSLIQTGELYRLRRKMGIVEYWVYFSFNLLEWEVFDPMNGYWMKLPRMPSNQYDCFTFSDKESLAVGTELLVFGKAIEAPVVYGYSLLTHTWSHGTQMSVPRCLFASASRGEIAIVAGGCNPLGKILSVAEMYNSDTKTWEALPNMNKARKMSAGVFMDGKFYALGGMGEDGNKLTCGEEYDLETKEWRVIPNMLPPRTSERQDTTEAPPLVAVVNNVLYAADYAQRVLRRYEKERNKWVYIGSLPEITSSMNGWGLAFRACGDRIVVIAGESAHGGRVVEINSWIPDGGAPLWNLLARRHIGGSFVYNCAVMGC* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0233 407 MobiDBLite consensus disorder prediction 1 30 - -
Gso5g0233 407 Pfam Kelch motif 193 239 IPR006652 GO:0005515
Gso5g0233 407 Pfam Kelch motif 241 286 IPR006652 GO:0005515
Gso5g0233 407 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 26 407 - -
Gso5g0233 407 SMART kelc_smart 205 252 IPR006652 GO:0005515
Gso5g0233 407 SMART kelc_smart 253 300 IPR006652 GO:0005515
Gso5g0233 407 SUPERFAMILY Kelch motif 117 391 IPR015915 GO:0005515
Gso5g0233 407 MobiDBLite consensus disorder prediction 10 27 - -
Gso5g0233 407 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 26 407 - -
Gso5g0233 407 Gene3D - 104 383 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0233 Gso-Chr5 2424905 2427882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0233 68 285 EF-hand Containing Proteins AT4G39560 24.775 8.25e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0233 - - gmx:100791318 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0233 5 2424905 2427882 Gso17g0829 17 7783588 7786316 GST
Gso1g0387 1 5061755 5065036 Gso5g0233 5 2424905 2427882 PCT
Gso2g0883 2 10050968 10055592 Gso5g0233 5 2424905 2427882 PCT