Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0387 ATGTTGGACGGTCGTTCCTGCGTTGTTCCGAGGATGTTTTCCGGCACTTGCCAGGCAGAGAACGATTGGTCTTACATGAAGTGCTTGCTGGAGTTGGACATCAAGAATGGCAAGCGCCCTATGGAGATTGATGATGTTGAGGAGGATGAGCCCCACCAGCCAAGGAAGTGTACTAAGAAGTTGGATTCTTGCCATAGAGTTGAAATGGCTCGAATTTCGTTTCAACGTCAATCTATTGAGGCCAAGGATTCTGTTGTTCCCCCTATGGATCAGGAGACCATTGAGCCACTGAGTGTTTGTCAAGGAGTTGTTGAAGAAGATGGAGCTTTGACCGACCAGCTATTGGATGAGAAAGAACAGGAGGTTGATGGTTATTTGATGGATTTTGGTGACCATCAATCTGATAAACAGCAGCAGGCTCAGACGGGGGATTCATCAGATTTCGGTGCTCAGCTATCTGATGAAGATCAATTGCAGCATGATGATGAGAATTTATTGAATTCGAGTGAGCAGCAATCCGAGGGGCAGCAGCAGCACCATGGTGGGGATTCTTCGGATTCCAGTTCTCTCTTGCCACGCATGAACCGGGACAGTTCAATCGCCTGTCTCAGCCGCTGTTCAAGGTCAGATTATGGTTCTCTCGCCTCGCTGAATAGGAGCTTCTGGAACATAATCCGAAGCGGTGAGCTCTATCAGTGGAGGAGACTGAATGGTATCATGGAACACTGGATTTATTTTTCCTGCGCCCTCCTCGAATGGGAGGCCTATGATCCGATTCGCCAGCGGTGGATGCATTTGCCAAGGATGGCTTCTAATGAATGCTTCATGTGTTCAGATAAGGAATCTTTAGCTGTAGGTACTGAGCTGCTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCACTTACAGATACAGTCTCTTGACAAACTCGTGGACGTCCGGAACAAGGATGAATGCTCCAAGATGCTTGTTTGGCTCAGCAAGCCTTGGTGAGATTGCAATATTAGCTGGTGGGTGTGATTCAGAGGGACACATCCTTGACTCTGCTGAATTATATAATTCTGAGACTCAAACATGGGAAACACTCCCATGTATGAAAAAACCCAGGAAGATGTGCTCTGGGGTATTTATGGATGGAAAGTTTTATGTTATAGGGGGGATTGGGGGGTGTGATTCTAAGCTCCTCACATGTGGAGAGGAGTACAATTTACAGACTAGGACATGGACCGAGATTCCGAGCATGTCCCCTGGACGGAGTAGTAGGGGTCCTGAGATGCCTGCAACAGCTGAGGCACCACCTCTGGTTGCTGTTGTAAATGATGAATTGTATGCTGCTGATTATGCCGACATGGAGGTTAAGAAGTATGACAAGGAGAGAAAAGTGTGGTTAACCATTGGGAGACTGCCGGAACGAGCAGTGTCAATGAATGGCTGGGGTCTTGCATTCAGGGCATGTGGAGATAAGCTTATTGTCATTGGTGGACCTAGGACTCATGGCGAGGGCTTTATTGAACTCAATTCATGGGTGCCTAGTGAAGGACCTCCACGGTGGGATCTACTTGCTAGAAAACGTTCCGGCAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1614 0.4777 MLDGRSCVVPRMFSGTCQAENDWSYMKCLLELDIKNGKRPMEIDDVEEDEPHQPRKCTKKLDSCHRVEMARISFQRQSIEAKDSVVPPMDQETIEPLSVCQGVVEEDGALTDQLLDEKEQEVDGYLMDFGDHQSDKQQQAQTGDSSDFGAQLSDEDQLQHDDENLLNSSEQQSEGQQQHHGGDSSDSSSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFWNIIRSGELYQWRRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVTYRYSLLTNSWTSGTRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSETQTWETLPCMKKPRKMCSGVFMDGKFYVIGGIGGCDSKLLTCGEEYNLQTRTWTEIPSMSPGRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERKVWLTIGRLPERAVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLLARKRSGNFVYNCAVMGC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0387 537 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 537 - -
Gso1g0387 537 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 537 - -
Gso1g0387 537 SUPERFAMILY Kelch motif 250 533 IPR015915 GO:0005515
Gso1g0387 537 SMART kelc_smart 380 440 IPR006652 GO:0005515
Gso1g0387 537 SMART kelc_smart 288 331 IPR006652 GO:0005515
Gso1g0387 537 SMART kelc_smart 332 379 IPR006652 GO:0005515
Gso1g0387 537 Pfam Kelch motif 320 365 IPR006652 GO:0005515
Gso1g0387 537 Pfam Kelch motif 368 415 IPR006652 GO:0005515
Gso1g0387 537 MobiDBLite consensus disorder prediction 166 191 - -
Gso1g0387 537 Gene3D - 237 516 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0387 Gso-Chr1 5061755 5065036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0387 197 362 EF-hand Containing Proteins AT4G39560 26.519 8.06e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0387 - - gmx:100818865 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0387 1 5061755 5065036 Gso2g0883 2 10050968 10055592 GST
Gso1g0387 1 5061755 5065036 Gso5g0233 5 2424905 2427882 PCT
Gso1g0387 1 5061755 5065036 Gso17g0829 17 7783588 7786316 PCT