Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0883 ATGTTGGACGGTCGTTCCTGCGTTGTTCCGAGGTTGTTTTCCGGCACTTGCCAGGCGGAGAACGAATGGTCTTACATGAAGTGCTTGCTGGAGTTGGACATCAAGAATGGCAAACGCCCTATGGGGATTGATGATGTTGAGGAGGATGAGCCCCACCAGCCAAGGAAGTGTACTAAGAAGTTGGATTCTTGCCATAGAGTTGAAATGGCTCGAATTTCATTTCAACGGCAATCTATTGAGGCCAAGGATTCTGTAGTTGTTCCCCCTTTGGATCAAGAGACCATTGAGCCATTGAGTGTTTGTCAAGGAGTTGTTGGAGAAGAAGGAGCTTTGACTGACCGGCTATTGTGTGAGAAAGAACATGAGGGTGATGGTGATTTGATGGATTTTGGTGACCATCAATCTGATAAACAGCAGCAGGCTCAGCCGGGGGATTTGTCAGATTTCGGTGTTCGGCTATTTGATGAAGATCAGTTGCAGCATGATGATAATTTATTGAATTTGAGTGAGCAGCAATCCGAGGGGCGGCAGCAGCAGCACCACCATGGTGGGGATTCTTCGGATTCCAGTTCTCTCTTGCCACGCATGAACCGGGACAGCTCAATCACCTGTCTCAGCCGCTGTTCGAGGTCAGATTATGGTTCTCTCGCCTCGCTGAATAGGAGCTTCCGGAACATAATCCGAAGTGGTGAGCTCTATCAATGGAGGAGACTGAATGGTATCATGGAGCACTGGATTTATTTTTCCTGCGCCCTCCTCGAATGGGAGGCCTATGATCCGATTCGCCAGCGGTGGATGCATCTGCCAAGGATGGCTTCTAATGAATGCTTCATGTGTTCAGATAAGGAATCTTTAGCTGCTGGCACTGAGCTGCTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCACTTACAGATACAGTCTCTTGACAAACTCGTGGACCTCTGGAACAAGGATGAATGCTCCAAGATGCTTGTTTGGCTCAGCAAGCCTTGGTGAGATTGCAATATTAGCTGGTGGGTGTGATTCAGAGGGACACATCCTTGACTCTGCTGAGTTATATAATTCCGAGACTCAAACGTGGGAAACACTCCCAAGAATGAAAAAACCCAGGAAGATGTCCTCTGGGGTATTTATGGATGGAAAGTTTTATGTTATAGGGGGGATTGGGGGGAGTGACTCTAAGCTCCTCACATGTGGAGAGGAGTACAATTTACAGACTAGGACATGGACTGAGATTCCTAACATGTCCCCCGGACGTAGTAGTAGGGGTCCTGAGATGCCTGCAACAGCTGAGGCACCACCTCTGGTTGCTGTTGTAAATGATGAATTGTATGCTGCTGATTATGCTGACATGGAGGTTAAGAAGTATGACAAGGAGAGAAATGTGTGGTTTACCATTGGGAGACTGCCAGAACGAGCAGTGTCAATGAATGGCTGGGGTCTTGCATTCAGGGCATGTGGAGATAAGCTTATTGTCATTGGTGGACCTAGGACTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTGCCTAGTGAAGGGCCTCCACGGTGGGATCTACTTGCTAGAAAACGTTCTGGCAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1620 0.479 MLDGRSCVVPRLFSGTCQAENEWSYMKCLLELDIKNGKRPMGIDDVEEDEPHQPRKCTKKLDSCHRVEMARISFQRQSIEAKDSVVVPPLDQETIEPLSVCQGVVGEEGALTDRLLCEKEHEGDGDLMDFGDHQSDKQQQAQPGDLSDFGVRLFDEDQLQHDDNLLNLSEQQSEGRQQQHHHGGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNRSFRNIIRSGELYQWRRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAAGTELLVFGRELRSHVTYRYSLLTNSWTSGTRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSETQTWETLPRMKKPRKMSSGVFMDGKFYVIGGIGGSDSKLLTCGEEYNLQTRTWTEIPNMSPGRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERNVWFTIGRLPERAVSMNGWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLLARKRSGNFVYNCAVMGC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0883 539 MobiDBLite consensus disorder prediction 123 147 - -
Gso2g0883 539 Pfam Kelch motif 322 367 IPR006652 GO:0005515
Gso2g0883 539 Pfam Kelch motif 370 417 IPR006652 GO:0005515
Gso2g0883 539 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 539 - -
Gso2g0883 539 SUPERFAMILY Kelch motif 252 535 IPR015915 GO:0005515
Gso2g0883 539 SMART kelc_smart 382 442 IPR006652 GO:0005515
Gso2g0883 539 SMART kelc_smart 290 333 IPR006652 GO:0005515
Gso2g0883 539 SMART kelc_smart 334 381 IPR006652 GO:0005515
Gso2g0883 539 MobiDBLite consensus disorder prediction 171 194 - -
Gso2g0883 539 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 539 - -
Gso2g0883 539 Gene3D - 248 522 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0883 Gso-Chr2 10050968 10055592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0883 199 415 EF-hand Containing Proteins AT4G39560 25.806 7.45e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0883 - - gmx:100820308 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0883 2 10050968 10055592 Gso2g0883 2 10050968 10055592 ECH
Gso1g0387 1 5061755 5065036 Gso2g0883 2 10050968 10055592 GST
Gso2g0883 2 10050968 10055592 Gso5g0233 5 2424905 2427882 PCT
Gso2g0883 2 10050968 10055592 Gso17g0829 17 7783588 7786316 PCT