Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1320 ATGGTAGAATATGCTTCGAGAACCAACCTTAGCTACTGTCGAGATTATGGCATTGAGGAGGACTCCATAGATGACATGCCTTTAAAAAGTGACCCCGAATGCTATGACGATGATGGCCATCTTAAACGAACAGGGACCATTTGGACTACAAGCTCCCACATAATAACAGCTGTGGTAGGATCTGGGGTGCTCTCCTTAGCCTGGGCAATAGCTCAGATGGGTTGGATTGCTGGTCCTGCAGTGATGATCTTATTCAGCATAGTCACTTTGTATACTTCATCATTTCTAGCTGATTGTTATCGTACTGGTGACCCCATGTTTGGGAAGAGAAACTATACTTTCATGGATGCAGTTAGCACCATTCTGGGCGGGTACAGTGTTACGTTTTGTGGGATAGTTCAGTACTTGAATCTTTTCGGAAGTGCAATAGGATACACAATTGCGGCTTCCCTTAGCATGATGGCAATCCAAAGGTCTCACTGTATCATCCAATCCTCTGATGGAGAAAACCAATGCAATATTTCAAGTATCCCATACACGATCTGTTTTGGTGCAGTGCAAATTTTCTTTTCACAAATTCCAGATTTTCATAACATGTGGTGGCTCTCAATAGTTGCTTCAGTCATGTCTTTCACCTATTCCATAATTGGCCTCGTTCTTGGAATTACCAAAATTGCAGAAACGGGAACTTTCAAGGGTAGCCTCACTGGAATAAGCATTGGAACTGTGACGGAGGCCCAAAAAGTTTGGGGTGTTTTCCAAGCTCTTGGTAACATAGCCTTCGCCTATTCATATTCTTTCGTTCTCCTAGAAATTCAGGATACCATCAAATCTCCACCATCTGAAGTAAAAACAATGAAGAAGGCTGCAAAGTTAAGTATTGCAGTGACCACAACATTTTATATGCTTTGTGGCTGCGTAGGCTATGCTGCTTTTGGAGATTCAGCACCTGGGAACCTGCTTGCTGGATTTGGTTTCCATAAACTATATTGGCTTGTGGATATTGCTAATGCTGCTATTGTAATTCACCTTGTGGGGGCATACCAAGTGTATGCTCAACCCCTCTTTGCCTTTGTAGAGAAGGAGACAGCAAAAAGATGGCCCAAAATTGACAAGGAATTCCAAATTTCTATTCCCGGTTTGCAATCCTACAATCAGAACATATTTAGCCTAGTTTGTAGGACAGTGTTTGTGATCATAACCACTGTTATATCAACGTTGCTTCCATTCTTCAATGATATTTTGGGAGTGATTGGAGCATTGGGGTTTTGGCCTTTAACTGTCTACTTTCCTGTGGAGATGTATATATTGCAAAAGAGGATTCCAAAATGGAGTATGAGATGGATTTCTCTGGAATTGATGAGTGTGGTGTGCCTCTTAGTAACAATTGCGGCTGGTCTTGGCTCAGTGGTTGGTGTCTATCTTGACCTCCAGTAA 1437 0.4224 MVEYASRTNLSYCRDYGIEEDSIDDMPLKSDPECYDDDGHLKRTGTIWTTSSHIITAVVGSGVLSLAWAIAQMGWIAGPAVMILFSIVTLYTSSFLADCYRTGDPMFGKRNYTFMDAVSTILGGYSVTFCGIVQYLNLFGSAIGYTIAASLSMMAIQRSHCIIQSSDGENQCNISSIPYTICFGAVQIFFSQIPDFHNMWWLSIVASVMSFTYSIIGLVLGITKIAETGTFKGSLTGISIGTVTEAQKVWGVFQALGNIAFAYSYSFVLLEIQDTIKSPPSEVKTMKKAAKLSIAVTTTFYMLCGCVGYAAFGDSAPGNLLAGFGFHKLYWLVDIANAAIVIHLVGAYQVYAQPLFAFVEKETAKRWPKIDKEFQISIPGLQSYNQNIFSLVCRTVFVIITTVISTLLPFFNDILGVIGALGFWPLTVYFPVEMYILQKRIPKWSMRWISLELMSVVCLLVTIAAGLGSVVGVYLDLQ* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1320 478 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 5 477 - -
Gso6g1320 478 Pfam Transmembrane amino acid transporter protein 43 474 IPR013057 -
Gso6g1320 478 PANTHER OS05G0424000 PROTEIN-RELATED 5 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1320 Gso-Chr6 12935554 12943457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1320 22 478 Organic Solute Cotransporters AT5G09220 67.245 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1320 K24917 - gmx:100777626 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1761 4 47726936 47733998 Gso6g1320 6 12935554 12943457 GST