Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0867 ATGCGCGTTTCTCTTTCATCATTTCATTGTTTTTTCAGAACAAATTCTACCAACATCCACCATTTAATAATATCCCTCCCTCTGACTCTCACCACCCTCCAACAACCTCTAATTTCACCTTGTTTGATTTCCCACACAACACGACACAATTATGCTCCTTTGAGAGTTATCAGCAACAGATCTCAGGTCCGAATTACCATCCCTTCTTCACAAGGTTCGCCTTTTGACCACAAATGTTCCATCTTTATATGCGTGGGACATGCCTGTGTTACAAGCACAAGCCGTTTTCGTTTTGGTCAGGGTACTGAGGGGTCTTCAACAGGGGAACTTAAAGCTCAACTTGATGAAGTACAGCACCCAAAGATTTTGTCAGAGAATTGTGATTTGAAGCCAGCCACCCTTGACGTTCCAGTACCCAGTGGTGTGCAGAAGAATTCAAGGGGCAATGTAAGGGTTATGAATCTTGAGAGTCCTGTGAAGACTGAAGTGGAGGAAGCTTATGAAGGGGAAGATGAGCATGAAGAATCACCTTCCATCAAGAGGGAGCTCTCTGATTTTGATCTCCAAGTCCTCGAAGTTGCTGCAAGCAAAGGAGGATATGATCCATCAAGTGAAGAGATAAAATACCCTAGTTTATACGAAAACCAAGCTAACATTCAATTGGAAGACAAAGACCATGAATACAGCAAAAAGAGTTGTGACATAATTCAAAGTGGACATGTCAGTGATCCTGGGATTGGCAAAGCTGAATTTTGTGCTTCTCCAAAGCTCAAGCGATCCTGCTCTGACCTGGAAAGAAGGGATGTACTAAGGGAGACTTGTCATCTCTTTCCATCTTCAAAGTCACAGTCTTTTGAGGATTTGCAGGGGTTATCAGCACATCAGATGGTTAATCTAGAAAGCCCCAGGTCTGTGATGACTCACCGCAGTGCTGATAGAGTGATGTTGAAAAGGCATTCCTCAAGTCAAGTTCTCCCTTCTAGAAGTAAAAGACTGTGGTGGAAGTTGTTCCTCTGGAGCCACAGGAATATACATAGATCTCAGTTAAGCAAATCGACACAAATACATCCTGTGACTGCTGCTTTAAATAGTCAATGTGGGTACTCCTCAGACACCCTTGAACCAAAACAAGACAAGGCTTTGAGCCATGTGGAATCACACTCACCAAGCTCATCGTTTGGGGAATACTTTCAGAAAAGCTGCGATGACAGAAATTTTGATAACCAAAGGTGGAGCAGATTTCAGAAAGATAATTTTGGTTTCTGGCCACAAAATCAATGGGTGGCTTTCTCCACAGAATCATCCTCATATAGCAGAGTGGATGAGTGGGTGAAAGATCTCGAAATTCAGCAGCCACCTCTTGAGGATGATTTCAATGATGACAATATTGGAAGCATTGCCTTCCCACCTTCTCCTGATGATGGTAGATCAATGGCAAGAAGCACAGCCCAGTTGATTCAACATCCAGATGCCAATCTTTCAAAGGAGATATTGAATGCCAATAGTGTGGTCCAGTCCCTGAACCCAGCCTCAACTGCAGCTCATATATCAAGCATTGGCATAAAAGCCATCCCCTCTCTTTCACACTTTTTCAGTCTCCGCTGTGTCAATTTGTCGAACAATCTCATAGTTCATATCACGCCCGGATTTCTCCCAAAGGGTATTCATACACTGAATCTGTCAAGAAACAAAATCAGCACTATTGAAGGCCTTAGAGAATTAACACGGCTGCGGGTACTTGACTTAAGTTATAATCGCATCTCAAGAATTGGACAAGGATTATCAAATTGTACCCTAGTCAAAGAGCTATATCTTGCTGGAAACAAGATAAGTGATGTTGAGGGGCTACATAGGTTATTGAAGCTAACAGTTCTGGACCTGAGCTTTAACAAGATCGCAACAACAAAAGCATTAGGCCAGCTGGTGGCTAACTACAACTCACTTCAGGCCCTGAATCTGCTTGGAAATCCAATTCAAAGCAACATCAGTGATGATCAGCTGCGCAAAGCAGTTTGTGGTCTTCTTCCAAAGCTTGTTTACCTGAACAAGCAATCTATCAAGACTCAAAGGGGACGAGAAATACTCACTGATAGTGTTGCCAAAGCTGCACTTGGTAACAGCAGCCGGACCTCCTACAGAAGAGCACTAAAGAAAGGTGGCGGCCATGGAGGGTCAAGTTCCTCCAGTGTGCATAGAAGCAGTGCTAGTGTTTCCCAGAAAATCAGGAACAGGTCAAGGAGCCAAACTAAACATCATTAG 2259 0.4338 MRVSLSSFHCFFRTNSTNIHHLIISLPLTLTTLQQPLISPCLISHTTRHNYAPLRVISNRSQVRITIPSSQGSPFDHKCSIFICVGHACVTSTSRFRFGQGTEGSSTGELKAQLDEVQHPKILSENCDLKPATLDVPVPSGVQKNSRGNVRVMNLESPVKTEVEEAYEGEDEHEESPSIKRELSDFDLQVLEVAASKGGYDPSSEEIKYPSLYENQANIQLEDKDHEYSKKSCDIIQSGHVSDPGIGKAEFCASPKLKRSCSDLERRDVLRETCHLFPSSKSQSFEDLQGLSAHQMVNLESPRSVMTHRSADRVMLKRHSSSQVLPSRSKRLWWKLFLWSHRNIHRSQLSKSTQIHPVTAALNSQCGYSSDTLEPKQDKALSHVESHSPSSSFGEYFQKSCDDRNFDNQRWSRFQKDNFGFWPQNQWVAFSTESSSYSRVDEWVKDLEIQQPPLEDDFNDDNIGSIAFPPSPDDGRSMARSTAQLIQHPDANLSKEILNANSVVQSLNPASTAAHISSIGIKAIPSLSHFFSLRCVNLSNNLIVHITPGFLPKGIHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIGQGLSNCTLVKELYLAGNKISDVEGLHRLLKLTVLDLSFNKIATTKALGQLVANYNSLQALNLLGNPIQSNISDDQLRKAVCGLLPKLVYLNKQSIKTQRGREILTDSVAKAALGNSSRTSYRRALKKGGGHGGSSSSSVHRSSASVSQKIRNRSRSQTKHH* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0867 752 Gene3D Ribonuclease Inhibitor 483 591 IPR032675 -
Gso4g0867 752 ProSiteProfiles Leucine-rich repeat profile. 599 620 IPR001611 GO:0005515
Gso4g0867 752 ProSiteProfiles Leucine-rich repeat profile. 621 642 IPR001611 GO:0005515
Gso4g0867 752 ProSiteProfiles Leucine-rich repeat profile. 554 575 IPR001611 GO:0005515
Gso4g0867 752 PANTHER NISCHARIN RELATED 93 751 - -
Gso4g0867 752 MobiDBLite consensus disorder prediction 710 752 - -
Gso4g0867 752 Pfam Leucine rich repeat 532 587 IPR001611 GO:0005515
Gso4g0867 752 SMART LRR_typ_2 619 641 IPR003591 -
Gso4g0867 752 SMART LRR_typ_2 530 552 IPR003591 -
Gso4g0867 752 SMART LRR_typ_2 574 597 IPR003591 -
Gso4g0867 752 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 93 751 - -
Gso4g0867 752 SMART LRR_sd22_2 574 596 - -
Gso4g0867 752 SMART LRR_sd22_2 552 573 - -
Gso4g0867 752 SMART LRR_sd22_2 597 618 - -
Gso4g0867 752 SMART LRR_sd22_2 619 640 - -
Gso4g0867 752 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Gso4g0867 752 Pfam Leucine Rich repeat 621 632 IPR001611 GO:0005515
Gso4g0867 752 SUPERFAMILY Outer arm dynein light chain 1 523 686 - -
Gso4g0867 752 MobiDBLite consensus disorder prediction 722 743 - -
Gso4g0867 752 Gene3D Ribonuclease Inhibitor 592 691 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0867 Gso-Chr4 9294001 9297881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0867 579 706 Receptor kinase-like Gene Family AT5G07280 35.878 3.31e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0867 - - gmx:100813969 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0867 4 9294001 9297881 Gso4g0867 4 9294001 9297881 ECH
Gso4g0867 4 9294001 9297881 Gso6g0862 6 8199505 8203359 GST
Gso14g1465 14 45500940 45504676 Gso4g0867 4 9294001 9297881 PCT
Gso13g0632 13 20334904 20352786 Gso4g0867 4 9294001 9297881 PCT
Gso4g0867 4 9294001 9297881 Gso14g1465 14 45500940 45504676 PCT
Gso4g0867 4 9294001 9297881 Gso13g0632 13 20334904 20352786 PCT