Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1465 ATGGCCATGGTTAGGTGCTTCTCTCTTTTGCCTGTGAGGAAGGACAAACACAAGGGGAATGAAAGGTCTTCAAAAGAGGACTTTAACACTCTACTTGCCAAACTACAATCTACAAAAAAAATAACATCAGAGTCAACCACTTTTGATGCCATTGGTATTCAGAAAAATTCAAGGTTCAATGCGACGAGGATTATGACCCTTGAGAGTCCTGTGAAGGCTGAAGCACATGAAACTTATAAAGATGAAGATTCACCATTGATCAAGAGAGAACTCTCTGATTTTGATCTCCAAGATCATGAAGCTGTTGCAAGCAACGCATATGATACAACAGATAAAAAGGTAGAGTACCCCATTTTATATGAAAACCAAGTCAACAATGAATTGGAAGACAAAAATGATAGATACAGCCAAAAGAGTGTCGATACAACTGAAAGCGGACACATCACTGATCCTGGAATTGGCAAGGCTGATTCCTGGGCTTCTCCAAAGTTCAAGAGACACTTCTCCAACCTTGAAAAATTTGATGAGCATGGGAAGATAACTCGTCACTTGCCGGCTTCAAAGTCGAAGTCTTTTGAGAATTTTCAGGAGTTATCAGCAATGGTTAATCTTGAAAGCCCTAGGTCTGTGATGAGTCACTACAGTGCTGATAGAGTATTGTTGAAAAGGCACTCTTCAAGTCAGGTACTCCCTTCTAGAAGTAAAAAACTGTGGTGGAAGATGATCCTATGGAGCCACAGGAACACACGCAGAACTCTCCCTAGCAATTCAACACTAGTTCCTACTAGTGCTGCTTTAAATAGTGGATACTCTTCAGACACCCTTGAACTGAAACAAGGCAAGGCATTGAGGCCTGTGAAATCTTCTGATTCAATTACTATGGAATCCTTTAACAAAAGAAGAATTGGTAAAAATATTGATAATCAAAGGGGGAGCAGGTTTCAAAGCGACCAATGGATTGCTTTCTCAACAGAATCATCTTCTTTTTCCAGAGTGGATGCATGGGTGAAGGGTCTCGAAATTCAGCAAATGCTTCCTGAGGATGATTTTGATGATGACAATGCCAGAAGAAGCATTGTCTTCCCACCTTCTCCTAATGCTGGTGGGTCAATGATGAGAACCACATCTCAGTTGACTTATCCAGATGCCAATCTTTCAAAAGAGGCTTTAACTGCGATTAGTGTAGTCCAGTCTCTAAATCCAGCTTCAACTATTGCTCACATATCTGGTATTGGTGTAAAAGCCATCCCTGCTATTTCACACTTATCCAATCTCCGCTCTGTCAACTTGTCAAATAATTTCATAGTTCACATCTCACCAGGAGTTCTACCAAAGGGTATTCAAACACTTAACTTATCAAAAAACAAGATCAGTGCCCTTGAGGGCCTCAGAGAATTGACCAAGTTGCGGGTACTTGACCTAAGCTACAACCGTATCTCGAGAATTGGACAAGGTTTGTCAAGTTGCACACTTATCAAAGAGCTATATCTTGTGGGGAACAAATTAAGTGATGTTGAAGGGCTACACAGGCTATTGAAGCTAACAGTTCTAGAGTTGAGCTTCAACAAGATCACAACAACAAAAGCATTAGGCCAGCTAGTGGCTAACTACAACTCACTTAAGGCCCTTAATCTCCTTGGAAATCCGATTCAAAGCAATATCAATGATGACCAGCTTAGCAAAGCAGTCTGTGGTCTCCTTCCAAAGGTGGTGTACCTGAACAAGCAACCCCTTAAGGCCAATAGGACACGCGAAATATTAAGCGATAGTGTTGCCAGAGCTGCACTCGGGAACAGCACACGGAGCTGTGAAAGAAGATCAGTAAGAAGAGTTGGCCATGGAGGATCAAATCTTTCCAGAGGGAATAGTAGAAATGCCAGTGTTTCCCAGAAAAGCATGAACCGGACAAGGAGGTGA 1917 0.4178 MAMVRCFSLLPVRKDKHKGNERSSKEDFNTLLAKLQSTKKITSESTTFDAIGIQKNSRFNATRIMTLESPVKAEAHETYKDEDSPLIKRELSDFDLQDHEAVASNAYDTTDKKVEYPILYENQVNNELEDKNDRYSQKSVDTTESGHITDPGIGKADSWASPKFKRHFSNLEKFDEHGKITRHLPASKSKSFENFQELSAMVNLESPRSVMSHYSADRVLLKRHSSSQVLPSRSKKLWWKMILWSHRNTRRTLPSNSTLVPTSAALNSGYSSDTLELKQGKALRPVKSSDSITMESFNKRRIGKNIDNQRGSRFQSDQWIAFSTESSSFSRVDAWVKGLEIQQMLPEDDFDDDNARRSIVFPPSPNAGGSMMRTTSQLTYPDANLSKEALTAISVVQSLNPASTIAHISGIGVKAIPAISHLSNLRSVNLSNNFIVHISPGVLPKGIQTLNLSKNKISALEGLRELTKLRVLDLSYNRISRIGQGLSSCTLIKELYLVGNKLSDVEGLHRLLKLTVLELSFNKITTTKALGQLVANYNSLKALNLLGNPIQSNINDDQLSKAVCGLLPKVVYLNKQPLKANRTREILSDSVARAALGNSTRSCERRSVRRVGHGGSNLSRGNSRNASVSQKSMNRTRR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1465 638 ProSiteProfiles Leucine-rich repeat profile. 446 467 IPR001611 GO:0005515
Gso14g1465 638 SMART LRR_sd22_2 489 510 - -
Gso14g1465 638 SMART LRR_sd22_2 444 465 - -
Gso14g1465 638 SMART LRR_sd22_2 511 532 - -
Gso14g1465 638 SMART LRR_sd22_2 466 488 - -
Gso14g1465 638 MobiDBLite consensus disorder prediction 598 638 - -
Gso14g1465 638 Gene3D Ribonuclease Inhibitor 488 583 IPR032675 -
Gso14g1465 638 Gene3D Ribonuclease Inhibitor 364 487 IPR032675 -
Gso14g1465 638 ProSiteProfiles Leucine-rich repeat profile. 468 490 IPR001611 GO:0005515
Gso14g1465 638 SUPERFAMILY Outer arm dynein light chain 1 416 559 - -
Gso14g1465 638 Pfam Leucine rich repeat 423 479 IPR001611 GO:0005515
Gso14g1465 638 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 637 - -
Gso14g1465 638 SMART LRR_typ_2 422 445 IPR003591 -
Gso14g1465 638 SMART LRR_typ_2 511 533 IPR003591 -
Gso14g1465 638 SMART LRR_typ_2 466 489 IPR003591 -
Gso14g1465 638 ProSiteProfiles Leucine-rich repeat profile. 491 512 IPR001611 GO:0005515
Gso14g1465 638 ProSiteProfiles Leucine-rich repeat profile. 513 534 IPR001611 GO:0005515
Gso14g1465 638 PANTHER NISCHARIN RELATED 4 637 - -
Gso14g1465 638 MobiDBLite consensus disorder prediction 616 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1465 Gso-Chr14 45500940 45504676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1465 417 578 Receptor kinase-like Gene Family AT5G56040 32.778 5.30e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1465 - - gmx:100801034 1231.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1465 14 45500940 45504676 Gso13g0632 13 20334904 20352786 GST
Gso14g1465 14 45500940 45504676 Gso4g0867 4 9294001 9297881 PCT
Gso14g1465 14 45500940 45504676 Gso6g0862 6 8199505 8203359 PCT
Gso4g0867 4 9294001 9297881 Gso14g1465 14 45500940 45504676 PCT
Gso6g0862 6 8199505 8203359 Gso14g1465 14 45500940 45504676 PCT