Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0632 ATGACTCAGTGCTTCTTCAGCTTCACCGAGACCCGAAACCGGTGCTACCGGTCAATGTTCGCCGGCTCGGGTCTCCGCTCCACCGTCACGGACCTAAAAGACGGGACCGTGATGCACTGCTGGGAGCCAAAGGCCCGAGCCGAGTCGAAGCCAAGTCTGCTCCTAATCCACGGATTAGGCGCGAACGCGCTGTGGCAATGGGGGGACCTCATCCGCCACGTGGCGCCTCACTACAACGTGTACGTGCCAGACCTCGTGTTCTTCGGCGGGTCCTACACGGCCCGACCGGAGCGCGGGGAGCGGTTCCAGGCTGAGTGCGTGGCGCGGGTGATGGAGGCGAAGGGGGTGCGAAGGGTGAGTTTAGTGGGGCTGAGTTATGGCGGGTTTGTTGGGTACTGCATGGCAGCGATGGAGGAGGGGGTGGTTATGGTGGAGAGGGTGGTGGTGTGTGGGTCCGGGGTGTGTATGGAAGAGAGGGATGTGAAGGAAGGGCTTTTTCCTGTCATGGATTTGGATGAGGCTGCGAATATCTTGGTGCCGCGAACGCCGGAGAGACTTAGGGAGCTTGTTGGTTACACGTTTTTTAAACCACCTCCTTTGTGGTGGTTGCCCTCTTGCTTCCTACTTGATTTCATTGAGACAATGTGCAGGGACTATGAACAAGAAAAGAGAGAATTGATCAAAGCCCTTGCAAAGGACCGAAAAATCTCTGACCTCCCCAAGATATCTCAGCCCACATTAATTATCTGGGGAGAACATGATCAAGTATTTCCTTTAGAATTGGCTCACAGATTGAAAAGGCATTTAGGGGACAATGCTCAACTTGTGGTCATTAAGAATGCAGGGCATGCTTTCAATGTGGAGAAGTCAAAGGAGTTCTTCAGCATCTTGAAGTCCTATCTTGTGGATTCGCAGCTACCTGTTGAGAGCTCACCTTCAAAGTTGCAAAATAACAACAATCCAGAAGATGGGATTAACTACTCTCAATCTATTCCACAAGTTGAGCAACCTCCAACTAATCTTGAAAGTACTCCAACTCCTAATGTTGAACGTGCTCCAACTCCAACTACCATTCAAAGTTTATTTGGAGAGGAAAATATTGGTGGAGATTTGAAGAGGAGCATTTACAACTCTGGCCAACTCTATAGAGATATCTTCCCAAACCGGAAGAGGCTTAGGTCTTTATATTTCCGGTTTTCAGATTTGTTCAGAAAAAAGGGTTTGGAACAAGCTTTATCTTCTGGGATGGCCATGGTTTGGTGCTTCTCTCTTTTGCCTGTGAGGAAGGAGAAACTCAAGGGGAATGAAAGGTCTTCAAAAGAGGACTTTAACACTCTACTTGCCAAACTACAATCTACAAAAAAAATATCATCAGAGCCAGCCACTTTTGATGCCCTGTTCAATGCGAGGATTACGACCCTTGAGAGTCCTGTGAAGGCTGAAGCTCAGGAAACTTATAAAGATGAAGATTCAACATTGATCAAGAGAGAACTCTCTGATTTTTATCTCCAAGATCATGAAGCTGTGGCAAGCAAAGGATATGATACAACAGATAAAGAGGTAGAGTACCCCATTTTGTATGAAAACCAAGTCAACAATGAATTGGAAGACAAAAGTGATAGATTCAGCCGAAAGAGTGTTGATACAACCGAAAGCGGACACACCAGTGATCCTGGAATTGGCATGGCTGATTCCTGGGCTTCTCCAAAGTTCAAGAGATACTTATCCAACCTTGAAAAGTTTGATGAGCATGGGAAGATTACTCGTCACTTGCCAGCGGCTTCAAAGTCGAAGTCTTTCAAGAATTTTCAGGAGTTATCATCAATGGTCAGTCTTGAAAGCCCCAGGTCTGTGATGAGTCACCACAGTGCAGATAGAGTATTGTTGAAAAGGCACTCTTCAAGTCAGGTACTCCCTTCTAGAAGTAAAAAATTGTGGTGGAAGATGATCCTGTGGAGCCACAGGAACATACAGAGAACTCTCTCTAGCAATTCAACACTAGTTCCTACTAGTGCTGCTTTAAATAGTGGATACTCTTCAGACACCCTTGAACCAAAACAAGGCAAGGCATTGAGGCCTGTGAAGTCTTCTGATTCAATTACTATGGAATCCTTTAACAAACGAAGCAGAACTGGTAAAAATATTGATAATCAAAGGGGGAGCAGGTTTCAAAGTGACCAATGGATTTCTTTCTCAACAGAATCATCCTCTTTTACCAGAGTGGATGCATGGGTGAAAGGTCTCGAAATTCAGCAGCCGCTTCCTGAGGATGATTTTGATGTCGACAATGCTAGAAGCATTGTTTTCCCACCTTCTCCTAATGCTGGTGGATCAATGATCAGAACCACATCTCAGTTGACTTATCCAGATGCCAATCTTTCAAAAGAGGCTTTAACTGCCATAAGTGTAGTCCTGTCTCTAAATCCAACTTCAACTATTGCTCACATATCTGGTATTGGTATAAAAGCCATCCCTTCTATTTCACACTTATCCAGTCTCCGTGCTGTCAACTTGTCAAACAATTTCATAGTTCACATCTCACCAGGAGTTCTACCAAAGGGTATTCAAACACTTAACTTGTCAAAAAACAAAATCAGCACCCTTGAGGGCCTCAGAGAATTGGCCAAGTTGCGGATACTTGACCTAAGCTACAACCGCATTTCGAGAATTGGACAAGGTTTGTCAAGTTGTACACTAATCAAAGAGCTGTATCTTGTTGGGAACAAGATAAGTGATGTTGAAGGGCTACACAGGCTATTGAAGCTAACAGTTCTAGACTTGAGCTTCAACAAGATCACAACAGCAAAAGCATTAGGCCAGCTTGTGGCTAACTTCAACTCACTTAAGGCCCTTAATCTCCTTGGAAATTCAATTCAAAGCAACATCAGCGATGACCAGCTAAGCAAAGCAGTCTGTGGTCTTCTTCCAAAGATGGTGTACCTGAACAAGCAACCTGTCAAGGCTCATAGGACACGCGGAATATTAAGCGATAGTGTTGCCAGAGCTGCACTCGGGAGCAGCACGCGTAGCTGCAACAGAAGATCAATTAGAAGAGTTGGCCATGGAGGATCAAATCTCTCCAGAGGTAATAGAAGGAGTACCAGTGTTTCCCAGAAAAGCACGAACCGGACAAGGAAGTGA 3141 0.4556 MTQCFFSFTETRNRCYRSMFAGSGLRSTVTDLKDGTVMHCWEPKARAESKPSLLLIHGLGANALWQWGDLIRHVAPHYNVYVPDLVFFGGSYTARPERGERFQAECVARVMEAKGVRRVSLVGLSYGGFVGYCMAAMEEGVVMVERVVVCGSGVCMEERDVKEGLFPVMDLDEAANILVPRTPERLRELVGYTFFKPPPLWWLPSCFLLDFIETMCRDYEQEKRELIKALAKDRKISDLPKISQPTLIIWGEHDQVFPLELAHRLKRHLGDNAQLVVIKNAGHAFNVEKSKEFFSILKSYLVDSQLPVESSPSKLQNNNNPEDGINYSQSIPQVEQPPTNLESTPTPNVERAPTPTTIQSLFGEENIGGDLKRSIYNSGQLYRDIFPNRKRLRSLYFRFSDLFRKKGLEQALSSGMAMVWCFSLLPVRKEKLKGNERSSKEDFNTLLAKLQSTKKISSEPATFDALFNARITTLESPVKAEAQETYKDEDSTLIKRELSDFYLQDHEAVASKGYDTTDKEVEYPILYENQVNNELEDKSDRFSRKSVDTTESGHTSDPGIGMADSWASPKFKRYLSNLEKFDEHGKITRHLPAASKSKSFKNFQELSSMVSLESPRSVMSHHSADRVLLKRHSSSQVLPSRSKKLWWKMILWSHRNIQRTLSSNSTLVPTSAALNSGYSSDTLEPKQGKALRPVKSSDSITMESFNKRSRTGKNIDNQRGSRFQSDQWISFSTESSSFTRVDAWVKGLEIQQPLPEDDFDVDNARSIVFPPSPNAGGSMIRTTSQLTYPDANLSKEALTAISVVLSLNPTSTIAHISGIGIKAIPSISHLSSLRAVNLSNNFIVHISPGVLPKGIQTLNLSKNKISTLEGLRELAKLRILDLSYNRISRIGQGLSSCTLIKELYLVGNKISDVEGLHRLLKLTVLDLSFNKITTAKALGQLVANFNSLKALNLLGNSIQSNISDDQLSKAVCGLLPKMVYLNKQPVKAHRTRGILSDSVARAALGSSTRSCNRRSIRRVGHGGSNLSRGNRRSTSVSQKSTNRTRK* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0632 1046 SUPERFAMILY alpha/beta-Hydrolases 31 301 IPR029058 -
Gso13g0632 1046 MobiDBLite consensus disorder prediction 1010 1046 - -
Gso13g0632 1046 MobiDBLite consensus disorder prediction 309 357 - -
Gso13g0632 1046 PANTHER NISCHARIN RELATED 419 1045 - -
Gso13g0632 1046 Pfam Alpha/beta hydrolase family 53 293 IPR000073 -
Gso13g0632 1046 ProSiteProfiles Leucine-rich repeat profile. 899 920 IPR001611 GO:0005515
Gso13g0632 1046 ProSiteProfiles Leucine-rich repeat profile. 876 898 IPR001611 GO:0005515
Gso13g0632 1046 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 419 1045 - -
Gso13g0632 1046 SUPERFAMILY Outer arm dynein light chain 1 818 984 - -
Gso13g0632 1046 MobiDBLite consensus disorder prediction 537 551 - -
Gso13g0632 1046 MobiDBLite consensus disorder prediction 1026 1046 - -
Gso13g0632 1046 Gene3D Ribonuclease Inhibitor 897 991 IPR032675 -
Gso13g0632 1046 Pfam Leucine rich repeat 832 887 IPR001611 GO:0005515
Gso13g0632 1046 SMART LRR_sd22_2 897 918 - -
Gso13g0632 1046 SMART LRR_sd22_2 919 940 - -
Gso13g0632 1046 SMART LRR_sd22_2 874 896 - -
Gso13g0632 1046 SMART LRR_sd22_2 852 873 - -
Gso13g0632 1046 MobiDBLite consensus disorder prediction 676 699 - -
Gso13g0632 1046 ProSiteProfiles Leucine-rich repeat profile. 921 942 IPR001611 GO:0005515
Gso13g0632 1046 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Gso13g0632 1046 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Gso13g0632 1046 PRINTS Alpha/beta hydrolase fold signature 246 260 IPR000073 -
Gso13g0632 1046 Coils Coil 209 229 - -
Gso13g0632 1046 MobiDBLite consensus disorder prediction 537 564 - -
Gso13g0632 1046 Gene3D Ribonuclease Inhibitor 772 896 IPR032675 -
Gso13g0632 1046 ProSiteProfiles Leucine-rich repeat profile. 854 875 IPR001611 GO:0005515
Gso13g0632 1046 Gene3D alpha/beta hydrolase 21 304 IPR029058 -
Gso13g0632 1046 SMART LRR_typ_2 919 941 IPR003591 -
Gso13g0632 1046 SMART LRR_typ_2 830 853 IPR003591 -
Gso13g0632 1046 SMART LRR_typ_2 874 897 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0632 Gso-Chr13 20334904 20352786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0632 825 986 Receptor kinase-like Gene Family AT5G56040 32.778 1.18e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0632 - - gmx:100808998 2042.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1465 14 45500940 45504676 Gso13g0632 13 20334904 20352786 GST
Gso13g0632 13 20334904 20352786 Gso4g0867 4 9294001 9297881 PCT
Gso13g0632 13 20334904 20352786 Gso6g0862 6 8199505 8203359 PCT
Gso4g0867 4 9294001 9297881 Gso13g0632 13 20334904 20352786 PCT
Gso6g0862 6 8199505 8203359 Gso13g0632 13 20334904 20352786 PCT