Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1847 ATGGCGGTTACTACTCGCACTCTATCTGCCACAGAAAAGAAACACTGGTGGCTTACCAACCGAAAGATTGTCGAGAAATACATTAAGGATGCAAGGAGCTTAATAGCGACGCAAGATCAGAGCGAGATAGCTTCGGCTCTGAACCTTGTAGATGCGGCACTGGCGATTTCTCCGAGGTTTGACCAAGCGCTTGAGCTGAGAGCGAGGGCGTTGCTGTATTTGCGGCGGTTCAAGGAGGTTGCGGATATGCTTCAGGACTACATTCCGAGCCTGAGAATGGGAAACGATGACTCATCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGACACCTCTTCTCAGCAGCTTTCGAGGGAGGGAGTGAAGCTTCTCTCTTCTTCCTCGGAGTCTCCGGTGAGGGATCATAGTTTCAAGTGCTTCTCTGTGTCTGACCTCAAGAAGAAGGTGATGGCAGGGCTGTGTAAAACTTGCGACAAGGAAGGGCAATGGAGATACTTGGTGTTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACAGGGAAACGCATTGCAAGCGCGGCATTCCGGCGCGAGAGTGTGTGCTGGTCTGAAGACAGCTTTTATGTTACCAATATACCCTTCTCCGGAGATTCCACAAACGCGCCACCCTCAACTCCGCCGCGAACCCTTCTCGCGGACTCCGAGAGCGTGGCCCAACTCCTCGGCCACATTAAGTTCCTCCTCCGCCGCCGCGCCGCCGCACTCGCCGCCCTCGACGCCGGGCTCTACTCCGAGGCCATCCGCCACTTCTCGAAAATCGTCGACGGCCGGCGCAGCGCGCCGCAGAGCTTCCTCGCCGAATGCTACATGCACCGCGCCTCCGCGCACCGTTCCGCAGGGCGAATCGCCGAGTCAATTGCCGATTGCAACCGCACCCTCGCATTGGACCCCACTTGCATCCAAGCACTCGAAACAAGAGCTTCACTCTTCGAAACAATTCGCTGTTTACCAGATTCTCTTCACGATCTCGAACACTTGAAGCTTCTCTACAATTCAATCTTGCGTGATCGCAAGCTTCCTGGTCCTGCGTGGAAGCGCCACAACGTGCGCTACAGAGAAATTCCAGGGAAACTTTGCGCCCTCACTATTAAAATTCAGGAACTTAAACAGAGGTTGGCTTCTGGTGAAACTGGAAATGTTGATTACTATGCTTTGATTGGTGTCCGACGAGGTTGTTCCCGGTCGGAGTTGGAGAGGGCACACTTGTTGCTTTCCTTGAGGCATAAGCCTGATAAGGCAACTGGGTTCATCGAAAGGTGCGAGCTTGCAGATGAGCGTGATGTTGAGTCTGTTAAAGAAAGGGTGAAAATGTCTTCATTGTTGTTATATAGATTGGTTCAGAAGGGTTACACTAATGTGATGGGTAATATTATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGGCTGCTTTGCAAGCTCTTGAAGCACAGAAAGAGAAAGCCAATGAAGCTGCTGCTGAGTTGAATAAGGTCGTTGAGAGTAATAGTACTCAAATGTCTCAAAATAGGTCTATGGTGTCTTCTTCTACGGTGAATCCGGCGGTGTTTCAGGGTGTTTTCTGCCGTGATCTTACGGTGGTGGGGAACTTGCTTTCTCAGGCGGGGTTTAACCGATCCATGCCGGTGAAGTATGAAGCTTTGAGCTGTTGA 1722 0.5122 MAVTTRTLSATEKKHWWLTNRKIVEKYIKDARSLIATQDQSEIASALNLVDAALAISPRFDQALELRARALLYLRRFKEVADMLQDYIPSLRMGNDDSSSSSSSSSSSSSSDTSSQQLSREGVKLLSSSSESPVRDHSFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSEDSFYVTNIPFSGDSTNAPPSTPPRTLLADSESVAQLLGHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRSAPQSFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTIKIQELKQRLASGETGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKATGFIERCELADERDVESVKERVKMSSLLLYRLVQKGYTNVMGNIMDEEAAEKQRKKAALQALEAQKEKANEAAAELNKVVESNSTQMSQNRSMVSSSTVNPAVFQGVFCRDLTVVGNLLSQAGFNRSMPVKYEALSC* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1847 573 PANTHER - 1 573 - -
Gso3g1847 573 Coils Coil 481 518 - -
Gso3g1847 573 SMART tpr_5 289 322 IPR019734 GO:0005515
Gso3g1847 573 CDD DnaJ 404 438 IPR001623 -
Gso3g1847 573 SUPERFAMILY Chaperone J-domain 400 438 IPR036869 -
Gso3g1847 573 Gene3D DnaJ domain 390 535 IPR036869 -
Gso3g1847 573 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 573 - -
Gso3g1847 573 Gene3D Tetratricopeptide repeat domain 230 362 IPR011990 GO:0005515
Gso3g1847 573 MobiDBLite consensus disorder prediction 94 118 - -
Gso3g1847 573 SUPERFAMILY TPR-like 255 350 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1847 Gso-Chr3 44075835 44079335 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1847 - - gmx:100800231 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1811 19 46841125 46844641 Gso3g1847 3 44075835 44079335 GST
Gso3g1847 3 44075835 44079335 Gso2g0117 2 1212056 1215382 PCT
Gso3g1847 3 44075835 44079335 Gso10g0123 10 1302327 1305658 PCT
Gso2g0117 2 1212056 1215382 Gso3g1847 3 44075835 44079335 PCT
Gso10g0123 10 1302327 1305658 Gso3g1847 3 44075835 44079335 PCT