Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0123 ATGGCCGTGACCACTCCCTGTATCAATGCCACAGAAAAGAAGCACTGGTGGCTCACCAACCGAAAGATCGTAGAGAAATACATGAGAGACGCTCGGAGTCTGATAGCGACGCAGGAACAGAGCGAGATCGGTTCGGCGCTGAACCTTCTCGACGCAGCTCTGGCGATCTATCCGCGGCTGGACGAAGCGCTGGAGCTGAGAGCGAGGTGTCTGCTATATCTGAGAAGGTTCAAGGACGTGGCGGATATGCTTCAGGACTACATTCCGAGCCTGAGAATGGCGAACAACGACGACTCTGGTTCTTCTGTTTCTTCGGATAGTTCGCTTTCGAGGGAAGGTGTCAAGCTTCTCCCTTCCTCCGATTCCGATCAGAGTTTCAAGTGCTTCTCTGTCTCTGACTTGAAGAAGAAGGTTATGGCAGGGCTGTGTAAAACTTGCAACAACGAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGTTGCCACCTAGGCCTAATGGAAGACGCCATGGTCCTTCTCCAAACCGGCAAACGTCTAGCCACCGCCGCCTTCCGCCGAGAGAGCGTTTGCTGGTCCGACGACAGCTTCTCCCTCTCCAACCCCCTCTTCTCCGGCGACACCCCCACCACCCCACCCCCGGAGTCCGAAGCCGTCACCCAACTCCTCGCTCACATTAAGCTCCTCCTCCGCCGCCGCGCCGCCGCCCTCGCCGCCATTGATGCCGGCCTCCACTCTGAAGCCATCCGCCACTTCTCCAAAATCCTCGAGGGCCGCCGCGGCGCCCCTCAGGGCTTCCTCGCAGAGTGCTACATGCACAGAGCCTCCGCAAACCGCTCCGCCGGGCGAATCGCCGACTCAATCGCCGACTGCAACCGAACCCTCGCCCTGGACCCCACCAGCATCCAAGCCCTCGAAACCCGAGCCTCACTCTTCGAATCCATTCGCTGCTTCCCAGACTCCCTCCACGACCTCGAACACCTCAAGCTCCTCTACAACACCATCCTCCGCGACCGCAAGCTCGCGGGCCCCACCTGGAAGCAGTTGCGCCACCACAACAACCTGCGCTACAGAGAAATCCCAGGAAAGCTCTGCGCCCTCACCGTAAAAACACAAGAACTCAAACAGAGGATCGCTTCCGGGGACACCGGGAACGTCGACTACTACTCGCTCATCGGATTGCGGCGCGGTTGTGGGCGTTCGGAGCTGCAGAGGGCTCATTTGTTGCTGTGTCTGAAACACAAACCCGACAAGGCCACGTGTTTCGTCGAACGGTGCGAGCTGGCGGACGAGCGCGACCTCGACTCGGTTAAGGAAAGGGCGAAAATGTCGGCGCTGTTGCTCTACAGGCTGCTCCAGAAGGGTTACACAAACGTGATGGGAACCATCATGGATGAGGAAGCCGCTGAGAAACAGAGGAAGAAGGTTCTAGAAGCTCAAGTATTGATGAGTAATGAGAATTTGGAAGACAAGAAGTGCAACGTTTCCTCGCCTTCGACGGCGAACCCCTCTGTCTATCAGGGAGTGTTTTGCCGCGATATTGCGGTGGTTGGGAACTTGCTTTCGCAATCGGGGTTCAACCGCTCCATTCCGGTGAAGTACGAGGCGTTGAGCTGCTGA 1620 0.5735 MAVTTPCINATEKKHWWLTNRKIVEKYMRDARSLIATQEQSEIGSALNLLDAALAIYPRLDEALELRARCLLYLRRFKDVADMLQDYIPSLRMANNDDSGSSVSSDSSLSREGVKLLPSSDSDQSFKCFSVSDLKKKVMAGLCKTCNNEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLATAAFRRESVCWSDDSFSLSNPLFSGDTPTTPPPESEAVTQLLAHIKLLLRRRAAALAAIDAGLHSEAIRHFSKILEGRRGAPQGFLAECYMHRASANRSAGRIADSIADCNRTLALDPTSIQALETRASLFESIRCFPDSLHDLEHLKLLYNTILRDRKLAGPTWKQLRHHNNLRYREIPGKLCALTVKTQELKQRIASGDTGNVDYYSLIGLRRGCGRSELQRAHLLLCLKHKPDKATCFVERCELADERDLDSVKERAKMSALLLYRLLQKGYTNVMGTIMDEEAAEKQRKKVLEAQVLMSNENLEDKKCNVSSPSTANPSVYQGVFCRDIAVVGNLLSQSGFNRSIPVKYEALSC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0123 539 MobiDBLite consensus disorder prediction 96 123 - -
Gso10g0123 539 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 539 - -
Gso10g0123 539 Gene3D Tetratricopeptide repeat domain 17 491 IPR011990 GO:0005515
Gso10g0123 539 PANTHER - 1 539 - -
Gso10g0123 539 SUPERFAMILY TPR-like 235 331 IPR011990 GO:0005515
Gso10g0123 539 SUPERFAMILY Chaperone J-domain 383 421 IPR036869 -
Gso10g0123 539 CDD DnaJ 387 420 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0123 Gso-Chr10 1302327 1305658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0123 - - gmx:100780225 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0117 2 1212056 1215382 Gso10g0123 10 1302327 1305658 GST
Gso19g1811 19 46841125 46844641 Gso10g0123 10 1302327 1305658 PCT
Gso3g1847 3 44075835 44079335 Gso10g0123 10 1302327 1305658 PCT
Gso10g0123 10 1302327 1305658 Gso19g1811 19 46841125 46844641 PCT
Gso10g0123 10 1302327 1305658 Gso3g1847 3 44075835 44079335 PCT