Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0117 ATGGCCGTGACCACTCCCTGTCTCAATGCCACAGAAAAGAAGCACTGGTGGCTTACCAACAGAAAGATCGTAGAGAAATACATGAGAGACGCTCGGAGTCTGATAGCGACGCAGGAACAGAGCGAGATCGCTTCAGCGCTGAACCTTCTCGACGCGGCTCTGGCGATCTATCCGCGGCTCGACGAAGCGCTGGAGCTGAGAGCGAGGTCGCTGCTGTATCTGAGAAGGTTCAAAGACGTGGCGGATATGCTTCAGGACTACATTCCGAGCCTGAGAATGTCGAACAACGACGACTCTGGTTCTTCGTCTGTTTCTTCGGATAGTTCCCTTTCGAGGGAGGGTGTGAAGCTTCTCCCTTCCTCGCCCTCCGATCAGACTTTCAAGTGCTTCTCTTTCTCTGACTTGAAGAAGAAGGTTATGGCAGGCATGTGTAAAACTTGCCACAAAGAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGTTGCCACCTAGGCCTAATGGAAGACGCAATGGTCCTTCTCCAAACCGGCAAACGCCTAGCCACCGCCGCATTCCGCCGCGAGAGCGTGTGCTGGTCCGACGACAGCTTCTCCCTCTCCAACTCCCTCTTCTCCGGCGACACCCCCACCCCCACCACCCCACCCCGCGCCCCACTCCTGGAGTCCGAAGCCGTCACCCAACTCCTCGCCCACATAAAGCTCCTCCTCCGCCGCCGTGCCGCCGCCCTCGCCGCCCTGGACGCCGGCCTCCACTCGGAAGCCATCCGGCACTTCTCAAAAATCGTGGACGGCCGCCGCGGCGCCCCTCAGGGCTTCCTCGCGGAGTGCTACATGCACAGAGCCTCCGCGCACCACTCGGCCGGGCGAATCGCGGACTCAATCGGCGACTGCAACAGAACCCTCGCCCTGGACCCCACCTGCATCCACGCCCTCGAAACCCGAGCCTCCCTCCTCGAATCCATTCGGTGCTTCCCAGACTCCCTCCACGACCTCGAACACCTCAAGCTCCTCTACAACACCATCCTCCGGGACCACAAGCTCGCGGGCCCCACCTGGAAGAAGCGCCACCACAGCGTACGCTACAGAGAAATCCCCGGGAAGCTCTGCGCTCTCACCGTAAAAACCCAGGAACTCAAACAGAGGATCGCTTCCGGGGACACCGGGAACGTGGACTACCACGCGCTCATCGGGTTGCGGCGCGGGTGCGGGCGTTCGGAGCTGCAGAGGGCGCATCTGTTGTTGTGTCTGAAACACAAACCCGACAAGGCCACGTGCTTCATGGAGCGGTGCGAGCTGGCGGACGAGCGCGACCTCGACTCGGTTAAGGAAAGGGCGAAAATGTCGGCGCTGTTGCTCTACAGGTTGCTCCAGAAGGGTTACACCAATGTGATGGGTACCATCATGGAGGAGGAGGCTGCTGCCGAGAAGCAGAGGAAGAAGGTTCTAGAAGCTCAATTGATGAGTAATGAGAAATTGGAAGACAAGAAGTGCACCGTTTCATCGCCTTCGACGGCGAACCCCTCTGTTTATCAGGGGGTGTTTTGCCGCGATATTGCGGTGGTTGGGAACTTGCTTTCGCAATCGGGGTTCAACCGCTCCATTCCGGTGAAGTACGAGGCGATGAGCTGCTGA 1635 0.5878 MAVTTPCLNATEKKHWWLTNRKIVEKYMRDARSLIATQEQSEIASALNLLDAALAIYPRLDEALELRARSLLYLRRFKDVADMLQDYIPSLRMSNNDDSGSSSVSSDSSLSREGVKLLPSSPSDQTFKCFSFSDLKKKVMAGMCKTCHKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLATAAFRRESVCWSDDSFSLSNSLFSGDTPTPTTPPRAPLLESEAVTQLLAHIKLLLRRRAAALAALDAGLHSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAHHSAGRIADSIGDCNRTLALDPTCIHALETRASLLESIRCFPDSLHDLEHLKLLYNTILRDHKLAGPTWKKRHHSVRYREIPGKLCALTVKTQELKQRIASGDTGNVDYHALIGLRRGCGRSELQRAHLLLCLKHKPDKATCFMERCELADERDLDSVKERAKMSALLLYRLLQKGYTNVMGTIMEEEAAAEKQRKKVLEAQLMSNEKLEDKKCTVSSPSTANPSVYQGVFCRDIAVVGNLLSQSGFNRSIPVKYEAMSC* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0117 544 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 544 - -
Gso2g0117 544 CDD DnaJ 392 429 IPR001623 -
Gso2g0117 544 Gene3D Tetratricopeptide repeat domain 35 497 IPR011990 GO:0005515
Gso2g0117 544 Coils Coil 542 544 - -
Gso2g0117 544 PANTHER - 1 544 - -
Gso2g0117 544 MobiDBLite consensus disorder prediction 95 117 - -
Gso2g0117 544 SUPERFAMILY TPR-like 242 337 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0117 Gso-Chr2 1212056 1215382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0117 - - gmx:106797171 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0117 2 1212056 1215382 Gso2g0117 2 1212056 1215382 ECH
Gso2g0117 2 1212056 1215382 Gso10g0123 10 1302327 1305658 GST
Gso19g1811 19 46841125 46844641 Gso2g0117 2 1212056 1215382 PCT
Gso3g1847 3 44075835 44079335 Gso2g0117 2 1212056 1215382 PCT
Gso2g0117 2 1212056 1215382 Gso19g1811 19 46841125 46844641 PCT
Gso2g0117 2 1212056 1215382 Gso3g1847 3 44075835 44079335 PCT