Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1691 ATGGCTCCTCCTCCTTCTTCTTCTTACATTATCACTGTCTTTCTGTTACTATCTCTTCTCTCTCACATCGCTTTCACTTCCTCAAACCCCAACACCATCACTCTCCCACTCTCCCCTCTCCTCATCAAACCCCATTCCTCAGACTCAGATCCATTCCACTCTCTCAAATTTGCAGCTTCCGCTTCCCTAACCCGGGCCCACCACCTCAAACACCGCAACAACAATTCCCCCTCCGTAGCCACAACCCCAGCATACCCCAAATCCTACGGTGGCTACTCCATAGATCTCAACCTCGGAACCCCACCTCAAACCTCCCCCTTCGTTCTCGACACAGGTAGCAGCCTCGTTTGGTTCCCCTGCACCTCCCGCTACCTCTGCTCCCACTGCAACTTCCCCAACATCGACACCACCAAAATCCCAACCTTCATTCCCAAAAACTCCTCCACCGCCAAACTCCTCGGTTGCAGAAACCCCAAATGTGGCTACATCTTCGGCTCCGACGTTCAATTTCGCTGCCCCCAATGCAAACCAGAATCCCAAAACTGTTCCCTAACATGCCCCGCCTACATAATCCAATACGGCCTAGGCTCCACCGCAGGCTTCTTACTCCTCGACAACCTCAATTTCCCGGGAAAGACTGTTCCTCAATTTCTCGTAGGTTGCTCCATCCTATCCATTCGCCAACCCTCCGGAATCGCTGGCTTCGGTCGCGGCCAAGAGTCTCTCCCCTCACAAATGAATCTCAAAAGATTCTCATACTGCTTAGTTTCCCACCGCTTCGATGATACACCACAAAGCAGCGATCTCGTTTTGCAGATTAGCTCCACGGGCGACACCAAAACTAACGGCCTCAGCTACACGCCGTTTCGCTCCAACCCATCAACTAACAACCCGGCGTTTAAAGAGTACTACTATCTCACTCTTCGCAAGGTCATTGTTGGGGGCAAGGATGTTAAGATTCCGTATAAGTTTTTGGAGCCTGGCTCTGACGGTAACGGCGGCACCATCGTTGACTCTGGATCCACCTTCACGTTCATGGAAAGGCCCGTTTATAATTTGGTGGCACAAGAGTTTGTGAAGCAGTTGGAGAAGAATTATTCCAGGGCCGAGGACGCTGAGACCCAATCTGGGTTGAGTCCCTGTTTTAATATCTCCGGCGTCAAGACCGTCACTTTCCCCGAGTTGACTTTTAAGTTCAAAGGCGGCGCCAAAATGACGCAGCCGCTTCAGAATTATTTCTCATTGGTCGGAGATGCCGAGGTCGTGTGTTTGACCGTTGTCTCCGACGGAGGTGCCGGTCCGCCCAAGACAACCGGTCCGGCCATCATCTTGGGGAATTATCAGCAGCAGAATTTCTACATTGAATATGATTTGGAGAATGAGAGGTTCGGATTTGGTCCTCGTAGTTGCAGAAGGAAAGCTTAG 1425 0.513 MAPPPSSSYIITVFLLLSLLSHIAFTSSNPNTITLPLSPLLIKPHSSDSDPFHSLKFAASASLTRAHHLKHRNNNSPSVATTPAYPKSYGGYSIDLNLGTPPQTSPFVLDTGSSLVWFPCTSRYLCSHCNFPNIDTTKIPTFIPKNSSTAKLLGCRNPKCGYIFGSDVQFRCPQCKPESQNCSLTCPAYIIQYGLGSTAGFLLLDNLNFPGKTVPQFLVGCSILSIRQPSGIAGFGRGQESLPSQMNLKRFSYCLVSHRFDDTPQSSDLVLQISSTGDTKTNGLSYTPFRSNPSTNNPAFKEYYYLTLRKVIVGGKDVKIPYKFLEPGSDGNGGTIVDSGSTFTFMERPVYNLVAQEFVKQLEKNYSRAEDAETQSGLSPCFNISGVKTVTFPELTFKFKGGAKMTQPLQNYFSLVGDAEVVCLTVVSDGGAGPPKTTGPAIILGNYQQQNFYIEYDLENERFGFGPRSCRRKA* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1691 474 PANTHER BNACNNG47670D PROTEIN 6 470 - -
Gso3g1691 474 Pfam Xylanase inhibitor N-terminal 92 268 IPR032861 -
Gso3g1691 474 ProSiteProfiles Peptidase family A1 domain profile. 92 466 IPR033121 -
Gso3g1691 474 CDD pepsin_A_like_plant 91 470 IPR034161 -
Gso3g1691 474 SUPERFAMILY Acid proteases 87 470 IPR021109 -
Gso3g1691 474 Pfam Xylanase inhibitor C-terminal 304 466 IPR032799 -
Gso3g1691 474 PANTHER OS07G0603500 PROTEIN-RELATED 6 470 - -
Gso3g1691 474 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 107 118 IPR001969 GO:0004190|GO:0006508
Gso3g1691 474 Gene3D Acid Proteases 271 474 IPR021109 -
Gso3g1691 474 Gene3D Acid Proteases 67 264 IPR021109 -
Gso3g1691 474 PRINTS Pepsin (A1) aspartic protease family signature 98 118 IPR001461 GO:0004190|GO:0006508
Gso3g1691 474 PRINTS Pepsin (A1) aspartic protease family signature 335 346 IPR001461 GO:0004190|GO:0006508
Gso3g1691 474 PRINTS Pepsin (A1) aspartic protease family signature 442 457 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1691 Gso-Chr3 42782200 42784025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1691 63 472 Miscellaneous Gene Families AT1G44130 24.831 1.66e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1691 - - gmx:100805927 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1691 3 42782200 42784025 Gso3g1691 3 42782200 42784025 ECH
Gso19g1663 19 45550975 45553088 Gso3g1691 3 42782200 42784025 GST
Gso3g1691 3 42782200 42784025 Gso2g1682 2 40008456 40010253 PCT
Gso3g1691 3 42782200 42784025 Gso10g0680 10 8867943 8885215 PCT
Gso2g1682 2 40008456 40010253 Gso3g1691 3 42782200 42784025 PCT
Gso10g0680 10 8867943 8885215 Gso3g1691 3 42782200 42784025 PCT