Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1690 ATGGAAGAGACCAATTCCAGATTCAAGAGGATTTGCGTCTTCTGTGGGAGCAGTTCAGGGAAGAAACCTACCTATCAGGAAGCTGCTGTTCAACTTGGCAGGGAACTGGTGGAAAGAAGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGCTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAACAAGTCTTATGCCAAGAGAGATAACAGGTGATCCTATTGGGGAAGTGAGAGCCGTATCTAGTATGCACCAAAGGAAAGCCGAGATGGCCCGTCAAGCCGATGCTTTTATTGCCCTCCCTGGAGGATATGGAACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCGCAGCTTGGGATCCACAGCAAACCCGTGGGCCTGTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCGTTCATTGACAAAGCCGTTGATGAAGGCTTTATATCCCCTAAGGCACGTCGCATTATCGTGTCAGCACCCACAGCCAAACAATTGATGCTAGAGCTAGAGGAACATGTTCCCGAGCAAGATGAGTTTGCGTCCAAGTTGGTGTGGGAAGAAAGACTGAATTACGTGACTGAATCAGAAGTTGCCATGTGA 642 0.486 MEETNSRFKRICVFCGSSSGKKPTYQEAAVQLGRELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPTSLMPREITGDPIGEVRAVSSMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKQLMLELEEHVPEQDEFASKLVWEERLNYVTESEVAM* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1690 213 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Gso3g1690 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG2 2 205 - -
Gso3g1690 213 Gene3D - 1 185 - -
Gso3g1690 213 PANTHER LOG FAMILY PROTEIN YJL055W 2 205 - -
Gso3g1690 213 SUPERFAMILY MCP/YpsA-like 7 180 - -
Gso3g1690 213 Pfam Possible lysine decarboxylase 53 180 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1690 Gso-Chr3 42769953 42775202 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1690 K22522 - gmx:100792663 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1690 3 42769953 42775202 Gso3g1690 3 42769953 42775202 ECH
Gso19g1662 19 45535518 45540905 Gso3g1690 3 42769953 42775202 GST
Gso3g1690 3 42769953 42775202 Gso2g1685 2 40094707 40099357 PCT
Gso3g1690 3 42769953 42775202 Gso10g0679 10 8844553 8848649 PCT
Gso2g1685 2 40094707 40099357 Gso3g1690 3 42769953 42775202 PCT
Gso10g0679 10 8844553 8848649 Gso3g1690 3 42769953 42775202 PCT