Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1685 ATGGAAGAGACCAAATCCAAGTTCAAGAGGATTTGTGTGTACTGTGGAAGCAGTTCTGGTAACAAAGCCAGTTACCAAGAAGCTGCTGTGGAACTTGGCAAGGAGATGGTTGAGAGAAGAATTGATTTGGTCTATGGAGGTGGTAGCGTGGGCTTGATGGGTCTAGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTGGGCGTTATCCCAAAAAGCCTCATGCCAAGAGAGATAACTGGTGATCCTATTGGGGAAGTGAGAGCAGTATCCGATATGCATCAAAGAAAAGCTGAGATGGCTCGTCAAGCTGATGCATTCATTGCCCTTCCTGGGGGATATGGAACACTCGAAGAACTGCTTGAAATCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCGGTGGGCCTATTGAATGTGGAAGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATTTCACCAAAAGCACGTCGCATTATCGTGTCAGCACCCACAGCCAAAGATTTGGTTAGAGAGCTAGAGGAACATGTACCTGAGAGAGATGAAGTTGTATCCAAGTTGGTGTGGGAAGACAGGCTAAATTATGTGGTGCCTGAATCAGAAGTTGCCATGTGA 645 0.4636 MEETKSKFKRICVYCGSSSGNKASYQEAAVELGKEMVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPKSLMPREITGDPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHSKPVGLLNVEGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKDLVRELEEHVPERDEVVSKLVWEDRLNYVVPESEVAM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1685 214 SUPERFAMILY MCP/YpsA-like 7 186 - -
Gso2g1685 214 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Gso2g1685 214 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 4 211 - -
Gso2g1685 214 PANTHER LOG FAMILY PROTEIN YJL055W 4 211 - -
Gso2g1685 214 Gene3D - 1 185 - -
Gso2g1685 214 TIGRFAM TIGR00730: TIGR00730 family protein 9 185 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1685 Gso-Chr2 40094707 40099357 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1685 K22522 - gmx:100816928 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1685 2 40094707 40099357 Gso10g0679 10 8844553 8848649 GST
Gso19g1662 19 45535518 45540905 Gso2g1685 2 40094707 40099357 PCT
Gso3g1690 3 42769953 42775202 Gso2g1685 2 40094707 40099357 PCT
Gso2g1685 2 40094707 40099357 Gso19g1662 19 45535518 45540905 PCT
Gso2g1685 2 40094707 40099357 Gso3g1690 3 42769953 42775202 PCT