Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1662 ATGGAAGAGACCAATTCCAGATTCAAGAGGATTTGCGTCTTCTGTGGGAGCAGTTCAGGGAAGAAACCTACATATCAAGAAGCTGCTGTTCAACTTGGCAGGGAGCTGGTGGAAAGACGGATTGATTTGGTCTATGGAGGTGGTAGCGTGGGGCTGATGGGCCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAACAAGTCTTATGCCAAGAGAGATAACAGGTGATCCTATTGGGGAAGTGAGAGCCGTATCTAGTATGCACCAAAGGAAAGCCGAGATGGCCCGTCAAGCCGATGCCTTTATTGCCCTCCCTGGAGGATATGGAACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCGCAGCTTGGGATCCACAGCAAACCCGTGGGCCTGTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCGTTCATTGACAAAGCCGTTGATGAAGGCTTTATATCCCCTACGGCACGTCGCATTATCGTGTCAGCACCCACAGCCAAACAATTGATGCTAGAGCTAGAGGAACATGTTCCTGAGCAAGATGAGTTTGCGTCCAAGTTGGTGTGGGAAGAAAGACTTTACGTGACTGAATCAGAAGTTGCCATGTGA 639 0.4898 MEETNSRFKRICVFCGSSSGKKPTYQEAAVQLGRELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPTSLMPREITGDPIGEVRAVSSMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPTARRIIVSAPTAKQLMLELEEHVPEQDEFASKLVWEERLYVTESEVAM* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1662 212 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Gso19g1662 212 Gene3D - 1 185 - -
Gso19g1662 212 PANTHER LOG FAMILY PROTEIN YJL055W 2 209 - -
Gso19g1662 212 SUPERFAMILY MCP/YpsA-like 7 180 - -
Gso19g1662 212 Pfam Possible lysine decarboxylase 53 180 IPR031100 -
Gso19g1662 212 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG2 2 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1662 Gso-Chr19 45535518 45540905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1662 K22522 - gmx:100788087 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1662 19 45535518 45540905 Gso3g1690 3 42769953 42775202 GST
Gso19g1662 19 45535518 45540905 Gso2g1685 2 40094707 40099357 PCT
Gso19g1662 19 45535518 45540905 Gso10g0679 10 8844553 8848649 PCT
Gso2g1685 2 40094707 40099357 Gso19g1662 19 45535518 45540905 PCT
Gso10g0679 10 8844553 8848649 Gso19g1662 19 45535518 45540905 PCT