Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0679 ATGTTTAATCAACTTGCTTCATTTAAGGGTCTTTTAAGTTATTTTTTCTTCAAACTCTTCGGCACTTTCTCCTCCTTCCTTGTTGAGAGAAGAATTGATTTGGTCTATGGAGGTGGTAGCGTGGGTTTGATGGGTCTAGTTTCTCAGGCGGTTCATGATGGTGGGCGCCATGTTCTGGGCGTTATCCCAAAAAGCCTCATGCCAAGAGAGATAACTGGTGATCCTATTGGGGAAGTGAGAGCAGTATCTGATATGCATCAAAGGAAAGCTGAGATGGCTCGTCAAGCTGATGCATTCATTGCCCTTCCTGGGGGATATGGAACACTCGAAGAATTGCTGGAAATCATTACATGGGCTCAGCTTGGGATCCACAGCAAACCGGTGGGCCTATTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCCGTTGATGAAGGCTTTATTTCACCAAAAGCACGTCGCATTATCGTGTCAGCACCCACAGCTAAAGATTTGGTTAGGGAGCTAGAGGAACATGTACCTGAGAGAGATGAAGTTGTATCCAAGTTGGTGTGGGAAGACAGGCTAAATTACGTGGTGCCTGAATCAGAAGTTGCCATGTGA 618 0.4498 MFNQLASFKGLLSYFFFKLFGTFSSFLVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPKSLMPREITGDPIGEVRAVSDMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKDLVRELEEHVPERDEVVSKLVWEDRLNYVVPESEVAM* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0679 205 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 26 202 - -
Gso10g0679 205 PANTHER LOG FAMILY PROTEIN YJL055W 26 202 - -
Gso10g0679 205 Gene3D - 16 193 - -
Gso10g0679 205 TIGRFAM TIGR00730: TIGR00730 family protein 25 176 IPR005269 GO:0009691|GO:0016787
Gso10g0679 205 SUPERFAMILY MCP/YpsA-like 19 177 - -
Gso10g0679 205 Pfam Possible lysine decarboxylase 44 173 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0679 Gso-Chr10 8844553 8848649 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0679 K22522 - gmx:100810349 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1685 2 40094707 40099357 Gso10g0679 10 8844553 8848649 GST
Gso19g1662 19 45535518 45540905 Gso10g0679 10 8844553 8848649 PCT
Gso3g1690 3 42769953 42775202 Gso10g0679 10 8844553 8848649 PCT
Gso10g0679 10 8844553 8848649 Gso19g1662 19 45535518 45540905 PCT
Gso10g0679 10 8844553 8848649 Gso3g1690 3 42769953 42775202 PCT