Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1564 ATGCAGCGTCAAAGCCACATTTCGGTCGCAATTTCACTGATATGCATCCTGTTTTGTTCCAAATTAACTAGAGCTCTTGATGAACCTGAGTATGGTTACAACGAAAAAAGTGAAAATGGGCCCCAACACTGGGGCGATCTGAAAGAAGAATGGGCAGACTGTAAAATAGGGCAAATGCAATCTCCTATTGATTTGTCCACTAATGGAGTGGAAGTGATCCCCAAGTTAGGGGGACTAAAGTACTGGAACTATAAGCCTCAACATGCTATTGTCTCCAACAGGGGTCATGATGTTGCGGTCATGTGGGAAGATGATGCTGGCTCAATAGACATAAATGGAACACTTTTCTTCCTCCAACAAGCCCATTGGCACTGGCCTGCCGAACATACCATCAACGGCCGGAGATATGACTTGGAGTTGCACATGGTTCATGTTAGCACACAACCTGATGGAACAAACAAGACCGCTGTTGTTGGTATTCTGTACAAGTACGGTTCCCCCGATCCATTGCTCTCTAAGTTGGGAAAATACATAATGGAGATTCCTGAAGAGGACGAAGAGAAAAGCGTAGGGGTGATTGATCCCTCAGAAATCATAAAGGGCAGCAAGATGTACTACAGGTACATGGGATCACTCACTGCACCTCCTTGCACTGAAGACATCATTTGGACCGTTGATAAGAAGGTAAGAACTGTTTCAAGGGGGCAGGTGAAGTTGCTCAAGGATACGGTACTTAATTATTATGCCAAATGGAATGCAAGACCGCTACAGTTCATAAATCAACGAGAGATACAATTATACGTTCCAAAGATCAAGAATAAACCTCTGGATTAG 834 0.44 MQRQSHISVAISLICILFCSKLTRALDEPEYGYNEKSENGPQHWGDLKEEWADCKIGQMQSPIDLSTNGVEVIPKLGGLKYWNYKPQHAIVSNRGHDVAVMWEDDAGSIDINGTLFFLQQAHWHWPAEHTINGRRYDLELHMVHVSTQPDGTNKTAVVGILYKYGSPDPLLSKLGKYIMEIPEEDEEKSVGVIDPSEIIKGSKMYYRYMGSLTAPPCTEDIIWTVDKKVRTVSRGQVKLLKDTVLNYYAKWNARPLQFINQREIQLYVPKIKNKPLD* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1564 277 SMART Carb_anhydrase_2a 33 268 IPR001148 -
Gso3g1564 277 Pfam Eukaryotic-type carbonic anhydrase 39 265 IPR001148 -
Gso3g1564 277 PANTHER CARBONIC ANHYDRASE 1 276 IPR023561 GO:0004089|GO:0008270
Gso3g1564 277 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 1 276 - -
Gso3g1564 277 CDD alpha_CA_prokaryotic_like 40 266 IPR041891 -
Gso3g1564 277 Gene3D Alpha carbonic anhydrase 28 273 IPR036398 -
Gso3g1564 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 29 268 IPR001148 -
Gso3g1564 277 SUPERFAMILY Carbonic anhydrase 29 267 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1564 Gso-Chr3 41568835 41571285 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1564 K01674 - gmx:100776677 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1564 3 41568835 41571285 Gso3g1564 3 41568835 41571285 ECH
Gso19g1542 19 44343043 44345498 Gso3g1564 3 41568835 41571285 GST
Gso3g1564 3 41568835 41571285 Gso10g0509 10 5612554 5616220 PCT
Gso10g0510 10 5620795 5624487 Gso3g1564 3 41568835 41571285 PCT