Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1542 ATGCAGCGTCAAAGCCACATTTCGGTTGCAATTTCACTAATATGCATCCTGTTTTGTTCCACATTAACTAGTGCTCTTGATGAACCTGAGTATGGTTACAATGAAAAAAGTGCAAATGGGCCCCAACATTGGGGTGATCTGAAAGAAGAATGGGCAGCCTGTAAAATAGGGCAAATTCAATCTCCTATTGATTTGTCCACTAATGGAGTGGAAGTGATCCCCAAGTTAGGGGGGCTAAAGTACTGGAACTATAAGCCTCAACATGCTACTGTCTCCAACAGGGGTCATGATGTTGCGGTCATTTGGGAAGGGGATGCTGGCTCAATAGAAATAAATGGAACACCTTTCTTCCTCCAACAAGCCCATTGGCACTGGCCTGCCGAACATACCATCAACGGCCGCAGGTATGACTTGGAGTTGCACATGGTTCATGTTAGCCCACAGCCTGATGGAACAAACAAGACCGCTGTTGTTGGTGTTCTGTACAAGTACGGTTCCCCCGATCCACTGCTCTCTAAGTTGGGAAAATACATAATGGACACTCCTGAAGAGGATGATGAGAAAAGCGTAGGGGTGGTTGATCCCTCAGAAATCATGAAGGGCAGCAAGATGTACTACAGGTACATGGGATCACTCACTGCACCTCCTTGCACTGAAGACATCATTTGGACCGTTGATAAGAAGGTAAGAACTGTTTCAAGGGGGCAAGTGAAGTTGCTCAAGGATACGGTACTTAAATATTATGCCAAATGGAATGCAAGGCCGCTGCAGCCCCTAAATCAACGAGCGATACAACTTTACGTCCCAAAGACAAAGAATAAACCCGTGTATTAG 834 0.4568 MQRQSHISVAISLICILFCSTLTSALDEPEYGYNEKSANGPQHWGDLKEEWAACKIGQIQSPIDLSTNGVEVIPKLGGLKYWNYKPQHATVSNRGHDVAVIWEGDAGSIEINGTPFFLQQAHWHWPAEHTINGRRYDLELHMVHVSPQPDGTNKTAVVGVLYKYGSPDPLLSKLGKYIMDTPEEDDEKSVGVVDPSEIMKGSKMYYRYMGSLTAPPCTEDIIWTVDKKVRTVSRGQVKLLKDTVLKYYAKWNARPLQPLNQRAIQLYVPKTKNKPVY* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1542 277 Gene3D Alpha carbonic anhydrase 28 274 IPR036398 -
Gso19g1542 277 PANTHER CARBONIC ANHYDRASE 1 276 IPR023561 GO:0004089|GO:0008270
Gso19g1542 277 CDD alpha_CA_prokaryotic_like 40 266 IPR041891 -
Gso19g1542 277 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 1 276 - -
Gso19g1542 277 SMART Carb_anhydrase_2a 33 268 IPR001148 -
Gso19g1542 277 Pfam Eukaryotic-type carbonic anhydrase 39 265 IPR001148 -
Gso19g1542 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 29 268 IPR001148 -
Gso19g1542 277 SUPERFAMILY Carbonic anhydrase 30 264 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1542 Gso-Chr19 44343043 44345498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1542 K01674 - gmx:100799362 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1542 19 44343043 44345498 Gso3g1564 3 41568835 41571285 GST
Gso19g1542 19 44343043 44345498 Gso10g0509 10 5612554 5616220 PCT
Gso10g0510 10 5620795 5624487 Gso19g1542 19 44343043 44345498 PCT