Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0509 ATGAAGCATCCAGGCAAGCTTAGAGTGTTTCTTCCAAATTTGATAATACTTGTAACCATCCTTCTCCATTCAACATGGATTAATGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGGGAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGAAACATGTAAAAGTGGCAAAATGCAATCTCCAATTGATTTGTCAAGCCACAGAGTGAGAGTGGTGCCAAAGTTAGGGGAGCTTAAGAAGTACTATAAGCCTCAGAATGCCACTGTCAAGAACAGAGGCCATGATATTGAGCTGAAATGGGAGGGAGATGCTGGATCAATAAACATCAACGGCACCGAGTTTTTTCTGCATCAATGCCATTGGCATTCACCTTCAGAACATACAATCAATGGCAGGAGGTATGACTTGGAGCTCCACATGGTTCATGAAAGCAAAAGAATAAACGGGAAAGGCAAAATTGCTGTTGTTGGACTTTTCTATAAGATTGGACGGCCCGATTCTGTTCTCAACAAGTTGTCAAAATTTATAAAAACCATGGTGGATGAAGAAGAAGAAAAGAACATTGGGGCGTTCGATCCCTCAAAAATTAAGTTGGGTGGCAAGAAATACTACAGATACATGGGCTCTCTCACTGTCCCTCCTTGCACAGAAGGTGTCATTTGGACTATTAATAAAAAGATAAGAACTGTGTCGAGGGCTCAAGTCAATTTACTTAGAGAGGCTGTCCACGATCATGCAGAGAAGAATGCCAGACCTATACAACCCCTGAATAGACGAGGGATACAACTCTATGCCCAAAAGCGGAAGGATTAA 837 0.4241 MKHPGKLRVFLPNLIILVTILLHSTWINAQEVEDESEFDYIKGSEKGPSHWGELKKEWETCKSGKMQSPIDLSSHRVRVVPKLGELKKYYKPQNATVKNRGHDIELKWEGDAGSININGTEFFLHQCHWHSPSEHTINGRRYDLELHMVHESKRINGKGKIAVVGLFYKIGRPDSVLNKLSKFIKTMVDEEEEKNIGAFDPSKIKLGGKKYYRYMGSLTVPPCTEGVIWTINKKIRTVSRAQVNLLREAVHDHAEKNARPIQPLNRRGIQLYAQKRKD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0509 278 ProSitePatterns Alpha-carbonic anhydrases signature. 133 149 IPR018338 GO:0004089|GO:0008270
Gso10g0509 278 CDD alpha_CA_prokaryotic_like 47 271 IPR041891 -
Gso10g0509 278 PANTHER CARBONIC ANHYDRASE 14 276 IPR023561 GO:0004089|GO:0008270
Gso10g0509 278 SUPERFAMILY Carbonic anhydrase 37 269 IPR036398 -
Gso10g0509 278 ProSiteProfiles Alpha-carbonic anhydrases profile. 36 273 IPR001148 -
Gso10g0509 278 SMART Carb_anhydrase_2a 40 273 IPR001148 -
Gso10g0509 278 PANTHER ALPHA CARBONIC ANHYDRASE 3 14 276 - -
Gso10g0509 278 Pfam Eukaryotic-type carbonic anhydrase 47 270 IPR001148 -
Gso10g0509 278 Gene3D Alpha carbonic anhydrase 34 278 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0509 Gso-Chr10 5612554 5616220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0509 K01674 - gmx:100797935 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1542 19 44343043 44345498 Gso10g0509 10 5612554 5616220 PCT
Gso3g1564 3 41568835 41571285 Gso10g0509 10 5612554 5616220 PCT