Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0510 ATGAGTGCCTCAGTCATTGTTTCTCTTTCACATCTAACAAGTATGAAGCTTCAAAGAGTGAATACATATATAATTCCACATTTATTCGTGCTTTTCATAATCTTGTTAGCTTCAACATCAACACGAGCACAAGTTGAAGAACTTGAGGACGAGAGAGAGTTCGATTATATTGGAGCAAGTGAAAAGGGGCCTCGTCACTGGGGAGAGATGAAAAAAGAATGGTCATCTTGTAAAAATGGACACTTGCAATCTCCCATAGACTTGTCATGTGCAAGAGTCAAAATTATCCCTCGATGTCGCCAACCTGATATATACTACACAGCTACTAATGCCACTATCATCAACAGAGGCCATGATATTGCTGTATATTGGAAGGATGATGCTGGTTCAGTATACCTCAATGGAACCGAATACTTTCTGAAACAATGTCATTGGCACTCTCCTTCGGAACATTCCATGAATGGCAGGAGGTATGACTTGGAGATGCACATGGTGCATGTAAGTCCGGACAACAAGATTTTTGTGGTTGGAGCTCTCTATAAGTTTGGTCATCGTCCTGATCGTTTTCTCTCTCAGTTGGAGAAAGACATAAAGCACCTGGTTGATAATGAAGTAGAAAGAGCAATTGGAGAGACAAATCCCTCAGGATTACAGACAAGAGGCAATGCGTATTACAGATACGTAGGTTCACTCACCACTCCTCCTTGTACTGAAGGTGTCATCTGGAACATTGATAGAAAGATTAGGACAGTTTCGGAAGAACAAGTGAGGCTTTTGAGGGAGGCAGTGCATGACCATGCAGAGAGGAATGCAAGGCCAATGCAGCGACGTTACAATCGAGATATATTATACTTCCGATCCAAAAGCAGAGCAAAACCAGAATATTATTAA 891 0.4141 MSASVIVSLSHLTSMKLQRVNTYIIPHLFVLFIILLASTSTRAQVEELEDEREFDYIGASEKGPRHWGEMKKEWSSCKNGHLQSPIDLSCARVKIIPRCRQPDIYYTATNATIINRGHDIAVYWKDDAGSVYLNGTEYFLKQCHWHSPSEHSMNGRRYDLEMHMVHVSPDNKIFVVGALYKFGHRPDRFLSQLEKDIKHLVDNEVERAIGETNPSGLQTRGNAYYRYVGSLTTPPCTEGVIWNIDRKIRTVSEEQVRLLREAVHDHAERNARPMQRRYNRDILYFRSKSRAKPEYY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0510 296 Pfam Eukaryotic-type carbonic anhydrase 63 284 IPR001148 -
Gso10g0510 296 Gene3D Alpha carbonic anhydrase 50 293 IPR036398 -
Gso10g0510 296 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 9 295 - -
Gso10g0510 296 SUPERFAMILY Carbonic anhydrase 54 284 IPR036398 -
Gso10g0510 296 ProSitePatterns Alpha-carbonic anhydrases signature. 149 165 IPR018338 GO:0004089|GO:0008270
Gso10g0510 296 PANTHER CARBONIC ANHYDRASE 9 295 IPR023561 GO:0004089|GO:0008270
Gso10g0510 296 CDD alpha_CA_prokaryotic_like 63 284 IPR041891 -
Gso10g0510 296 ProSiteProfiles Alpha-carbonic anhydrases profile. 52 286 IPR001148 -
Gso10g0510 296 SMART Carb_anhydrase_2a 56 286 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0510 Gso-Chr10 5620795 5624487 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0510 K01674 - gmx:100784540 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g0510 10 5620795 5624487 Gso19g1542 19 44343043 44345498 PCT
Gso10g0510 10 5620795 5624487 Gso3g1564 3 41568835 41571285 PCT