Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1381 ATGTTTTTCCCACTTCGTCCACACACACTCATCCACTTGCTCCTACTTACTCCTATGTTTTTCATGGCAGGCATGGCAAGAGGAAGAGCAGATGTGAAATCTAGAAAAAATTTGGTCACTACAACTGTGTTGGTTTTGGTGACTGTTGGTGGTTTTTTCTACTTCTATTCTCAGAATAGTGATTCATCATCTTCTGTTGAGTATGGTGCTAAATCTTTGAGCCACACTGGTTTGGGAGGGGACAAAGATGATGGTGTATCTTCCTCCACACTTGTTGGAGGAGAAGTCATTGCTGTACCAAAGAGCATTCCAGTCTGTGATGATCGATTATCCGAGCTGATTCCTTGTCTGGACAGAAACCTCATATACCAAACAAGATTGAAGCTTGATTTATCTTTGATGGAGCACTATGAGAGACACTGCCCAACACCTGATAGGAGATTCAACTGTTTAATTCCTCCTCCTCCAGGGTACAAGGTTCCAGTCAAGTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAATATACCTCATACCCATCTTGCAACTGAAAAATCTGACCAGAACTGGATGGTTGTGAAAGGCGAAACAATAGTGTTTCCTGGTGGAGGAACCCACTTCCATAATGGTGCTGATAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCAAACAACAATATAAACAATGGGGGAAGAGTCAGGTCTGTTCTTGATGTTGGCTGTGGGGTTGCTAGCTTTGGAGGATACCTCCTTTCCTCCAATGTGATAGCAATGTCATTGGCACCAAATGATGTTCATCAAAATCAAATCCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTGGGGACCCAAAGACTCCCTTATCCGAGTAGATCATTTGAACTTGCTCATTGTTCGCGCTGTAGAATTGATTGGCTCCAGAGAGATGGTTTACTTCTCCTTGAGCTGGATAGGTTACTGAGGCCAGGAGGTTATTTCGCGTACTCGTCTCCCGAAGCCTATGCACAGGATGAAGAGGATAGGAGGATATGGAGAGAAATGAGTGCTCTTGTGGAGAGGATGTGTTGGAAAATAGCTGCTAAGAAGGATCAGACTGTTATTTGGGTCAAGCCTCTCACTAATAGCTGCTACTTAAAGAGATTGCCTGGTACTAAGCCTCCACTCTGCAGATCTGATGATGATCCTGATGCTGTTTTGGGAGTTAAAATGAAAGCTTGCATTTCACGTTATTCAGATCAAATGCACAAAGCAAAAGGAAGTGGTTTGGCTCCTTGGCCTGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTACTGAAATGTTTGAGAAGGACATGGGAGTTTGGAAACAACGAGTTCATAATTACTGGAGCAAGCTAGCCAGTAAGATTAAGCCTGACACAATTCGCAACGTGATGGATATGAAGGCGAATTTGGGTTCATTTGCAGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCAGAAAATGAACAAAAAAATCTCAAGATAATATACGACAGAGGACTGATAGGAACAGTTCACAACTGGTGTGAAGCATTTTCAACCTACCCTCGAACGTACGATCTACTCCATGCATGGACTGTGTTTTCTGATATTATTAAGAAAGAATGCAGTCCAGAGGATTTATTAATTGAGATTGACAGAATCCTAAGGCCAAAGGGTTTCATCATCATCCATGATAAGCGTTCCATGGTGGAGTACATAAAGAAATACCTGTCAGCATTACACTGGAATGCTGTGACCATATATGATGTAGATCAAGGTAAAGATGATGAAGTAGTGCTTATAATTCAAAAGAAGATGTGGCTCACAAGTGAAAGCATTAAGGTCTCAGAATAG 1902 0.4232 MFFPLRPHTLIHLLLLTPMFFMAGMARGRADVKSRKNLVTTTVLVLVTVGGFFYFYSQNSDSSSSVEYGAKSLSHTGLGGDKDDGVSSSTLVGGEVIAVPKSIPVCDDRLSELIPCLDRNLIYQTRLKLDLSLMEHYERHCPTPDRRFNCLIPPPPGYKVPVKWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGETIVFPGGGTHFHNGADKYIASIANMLNFPNNNINNGGRVRSVLDVGCGVASFGGYLLSSNVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTQRLPYPSRSFELAHCSRCRIDWLQRDGLLLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSALVERMCWKIAAKKDQTVIWVKPLTNSCYLKRLPGTKPPLCRSDDDPDAVLGVKMKACISRYSDQMHKAKGSGLAPWPARLTTPPPRLAEIHYSTEMFEKDMGVWKQRVHNYWSKLASKIKPDTIRNVMDMKANLGSFAAALKDKDVWVMNVVPENEQKNLKIIYDRGLIGTVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSPEDLLIEIDRILRPKGFIIIHDKRSMVEYIKKYLSALHWNAVTIYDVDQGKDDEVVLIIQKKMWLTSESIKVSE* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1381 633 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 150 374 IPR029063 -
Gso3g1381 633 Gene3D Vaccinia Virus protein VP39 443 609 IPR029063 -
Gso3g1381 633 Gene3D Vaccinia Virus protein VP39 227 373 IPR029063 -
Gso3g1381 633 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 30 631 IPR004159 GO:0008168
Gso3g1381 633 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 449 601 IPR029063 -
Gso3g1381 633 PANTHER METHYLTRANSFERASE PMT1-RELATED 30 631 - -
Gso3g1381 633 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 112 620 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1381 Gso-Chr3 39788532 39793716 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1381 - - gmx:100779883 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1376 19 42599195 42604494 Gso3g1381 3 39788532 39793716 GST
Gso3g1381 3 39788532 39793716 Gso10g0054 10 620731 627474 PCT
Gso10g0323 10 3475886 3480550 Gso3g1381 3 39788532 39793716 PCT