Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0054 ATGACGAGGGGAAGATATGATGGATCGCCAAAGAAGCATTTAGTTGCTTCCGTTTGTGGTGTGGCAGTCTTTCTTGGTTTGCTATATGTGTTCCAGCGATCCATCTTTGGTTCTCAGAATAGTGGTTCATCTGCGCTTGAATATGGCAGCAAGTCATTGAAAAGACTTGGGGCATCATATTTGGGTTCAGATGATGATGCTGATAGCAAGCAAGATGAATCTTCATCCAGTATTGCGCAGGGAGATGGTGAGGCTGATATTGTACCAAAGAGTTTCCCTGTTTGTGATGATCGTCATTCAGAATTGATTCCCTGCTTAGACAGACATCTTATCTATCAAATGAGACTGAAGCTGGATCTTTCTTTGATGGAACACTATGAGAGACATTGTCCTCCTGCAGAAAGGAGATTCAATTGTTTGATTCCTCCACCGGCAGGATACAAGGTCCCTATTAAGTGGCCACAGAGCAGAGATGAGGTGTGGAAAGCAAATATTCCACACACACACCTTGCACATGAGAAGTCTGACCAGAACTGGATGATTGTAAAAGGTGAAAAGATAGTGTTTCCTGGAGGAGGGACACATTTTCACAAAGGAGCTGACAAGTACATTGCATCAATTGCAAATATGCTCAATTTTTCAAACAACAATCTTAATAATGAAGGAAGACTGCGGACGGTTCTTGATGTTGGCTGTGGTGTTGCGAGTTTTGGAGCATATCTTCTTTCATCTGATATCATTGCAATGTCCTTGGCACCCAATGATGTGCATCAAAATCAAATTCAGTTTGCTCTAGAAAGAGGAATTCCTGCATATCTTGGTGTCTTGGGAACTAAGAGACTCCCTTATCCTAGCAGATCATTTGAACTTGCACACTGTTCTCGCTGCCGGATTGATTGGCTTCAGAGGGATGGAATACTACTCCTTGAGCTAGATCGGTTGCTTAGGCCAGGAGGTTACTTTGCATACTCATCTCCAGAAGCATATGCTCAGGATGAAGAGGATCAAAGGATATGGAGAGAGATGAGCGCCCTTGTGGGACGTATGTGTTGGAGAATTGCTGCAAAGAGGAACCAAACTGTCATCTGGCAAAAACCTCTAACAAATGAATGCTATATGGAGAGAGAACCCGGCACTCGCCCTCCTCTTTGCCAGTCTGATGATGACCCAGATGCAATTTGGGGAGTGAATATGGAAGCTTGCATAACACCTTACTCTGACCACGACAACAGAGCCAAGGGTAGTGGATTGGCTCCATGGCCTGCAAGATTGACCACTCCTCCTCCTAGATTAGCAGACTTTGGCTATTCAAACGAAATGTTTGAAAAGGATACGGAACTATGGCAAGGAAGAGTTGAGAATTACTGGAATCTGTTGGGTCCAAAAATCTCGTCGAACACAGTGAGGAATGTGCTGGATATGAAAGCCAATATGGGTTCATTTGCAGCTGCTCTTAGAGGCAAAGATGTTTGGGTGATGAATGTTGTACCTCGTGATGGACCTAACACACTAAAGCTTATATATGACAGAGGCCTCATAGGGTCTATCCATGACTGGTGTGAAGCATATTCAACATACCCCCGGACTTATGATTTACTCCATGCATGGACTGTGTTTTCTGACATTGAAACGAGAGGGTGCAGTCCAGAGGATCTACTGATTGAGATAGACCGTTTGCTTAGGCCTACAGGTTTCATCATCATAAGAGATAAACAGCATGTGATTGATTTTGTCAAGAAGTACCTAACAGCAATGCACTGGGAAGCAGTTGCAACTGCTGATGCTAGTGCTGACTCTGACCAAGATGGCAATGAAGTTATTATTGTCATCCAGAAGAAATTGTGGCTCACCACTGAAAGCCTTAGGAATACAGAATAG 1878 0.4372 MTRGRYDGSPKKHLVASVCGVAVFLGLLYVFQRSIFGSQNSGSSALEYGSKSLKRLGASYLGSDDDADSKQDESSSSIAQGDGEADIVPKSFPVCDDRHSELIPCLDRHLIYQMRLKLDLSLMEHYERHCPPAERRFNCLIPPPAGYKVPIKWPQSRDEVWKANIPHTHLAHEKSDQNWMIVKGEKIVFPGGGTHFHKGADKYIASIANMLNFSNNNLNNEGRLRTVLDVGCGVASFGAYLLSSDIIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDQRIWREMSALVGRMCWRIAAKRNQTVIWQKPLTNECYMEREPGTRPPLCQSDDDPDAIWGVNMEACITPYSDHDNRAKGSGLAPWPARLTTPPPRLADFGYSNEMFEKDTELWQGRVENYWNLLGPKISSNTVRNVLDMKANMGSFAAALRGKDVWVMNVVPRDGPNTLKLIYDRGLIGSIHDWCEAYSTYPRTYDLLHAWTVFSDIETRGCSPEDLLIEIDRLLRPTGFIIIRDKQHVIDFVKKYLTAMHWEAVATADASADSDQDGNEVIIVIQKKLWLTTESLRNTE* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0054 625 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 2 622 - -
Gso10g0054 625 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 622 IPR004159 GO:0008168
Gso10g0054 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 436 585 IPR029063 -
Gso10g0054 625 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 612 IPR004159 GO:0008168
Gso10g0054 625 Gene3D Vaccinia Virus protein VP39 216 367 IPR029063 -
Gso10g0054 625 MobiDBLite consensus disorder prediction 63 85 - -
Gso10g0054 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 358 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0054 Gso-Chr10 620731 627474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0054 - - gmx:100806600 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1376 19 42599195 42604494 Gso10g0054 10 620731 627474 PCT
Gso3g1381 3 39788532 39793716 Gso10g0054 10 620731 627474 PCT