Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0323 ATGACAAGAATGGGGAGAGGGAAAGCAGATGGGAAACCGAGAAAGCGGTTGGTCACAACTGTGTTACTTTTAGCGATTGTTGGTGCTTTATTTTACCTGTATTCTAGGAAAAATGGTTCATCTTCTATTGAGCATGGTAGCAAATCTGTAAAATTTGGAGATGACAGTGCTATACCAAAGACCATTCCAGTCTGTGATGATCGTCTATCGGAGCTGATTCCATGTCTAGACAGAAATTTCATATACCAAACAAGATTGAAGCTTGATCTGACTTTAATGGAGCACTACGAACGGCACTGCCCAATGCCTGAGCGGCGCTATAATTGTTTGATTCCCCCTCCTCCAGGGTACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTATGGAGGGCAAATATACCTCATACCCATCTTGCAACTGAGAAATCTGACCAGAGATGGATGGTTGTAAAAGGTGAAAAGATAGGTTTTCCTGGTGGAGGAACCCACTTCCATTATGGCGCTGGCAAGTATATTGCATCAATTGCCAATATGCTCAACTTTCCAAACAATGTGATTAACAATGAAGGAAGACTTCGCAATGTTTTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATATCTTCTTTCTTCTGATGTAATAGCAATGTCATTAGCACCAAATGATGTTCATGAAAACCAAATACAGTTTGCTTTAGAAAGAGGAATTCCGGCATATCTTGGTGTCTTGGGGACACTAAGACTCCCTTACCCTAGTAGATCTTTTGAACTTGCCCATTGTTCTCGCTGTAGAATTGATTGGCTTCAGAGAGATGGCATACTTCTTCTTGAGCTAGATAGGATACTCAGGCCGGGAGGCTACTTTGCCTACTCATCTCCTGAAGCCTATGCTCAGGATGAAGAGGATCAGAGAATATGGAAAGAAATGAGTGCTCTTGTAGGGAGGATGTGTTGGAAAATAGCTTCTAAGAGGAACCAGACTGTCATATGGGTCAAGCCTCTTACAAATGACTGTTACTTGAAAAGAGAGCCTGATACTCGCCCTCCGCTCTGCAGTCCTAATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGCTTGCATCTCACGCTACTCTGATCAGATGCACAGAGCAAAAGGAGCTGGTTTGGCTCCTTGGCCAGCTCGATTGACCACTCCACCTCCTCGTCTTGCTGACTTTAACTATTCCACTGAAATGTTTGAAAAGGACACGGAATATTGGCAACAAGAAGTTACTAATTACTGGAAAATGCTAGGCAATAAAATTAAGCCTGACACAATTCGGAATGTGATGGACATGAAAGCAAACTTGGGTTCATTTGCAGCTGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCAGAAAATGGGGCAAACACTCTCAAGATCATATATGACAGAGGGCTGTTAGGAACAGTTCACAACTGGTGTGAAGCATTTTCGACCTACCCTCGTACTTATGATCTGCTCCATGCATGGACTATATTTTCTGATATTATTGAGAAGGAGTGCAGTCCAGAGGATTTATTGATTGAGATGGATAGAATCCTGAGGCCGAAAGGTTTCATCATTGTCCATGATAAGCGATTGGTGGTGTTGTCTATAAAGAAGTTCTTGCCAGCATTGCACTGGGTTGCAGTGGTCACATCTAATGTAGAGCAAGATTCAAACCAAGGCAAAGATGATGCAGTGTTGATAATTCAGAAGAAGATGTGGCTGACAAGTGAGAGCATCCGCATTTCAGAATAA 1788 0.4267 MTRMGRGKADGKPRKRLVTTVLLLAIVGALFYLYSRKNGSSSIEHGSKSVKFGDDSAIPKTIPVCDDRLSELIPCLDRNFIYQTRLKLDLTLMEHYERHCPMPERRYNCLIPPPPGYKIPIKWPKSRDQVWRANIPHTHLATEKSDQRWMVVKGEKIGFPGGGTHFHYGAGKYIASIANMLNFPNNVINNEGRLRNVFDVGCGVASFGGYLLSSDVIAMSLAPNDVHENQIQFALERGIPAYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRILRPGGYFAYSSPEAYAQDEEDQRIWKEMSALVGRMCWKIASKRNQTVIWVKPLTNDCYLKREPDTRPPLCSPNDDPDAVWGVKMKACISRYSDQMHRAKGAGLAPWPARLTTPPPRLADFNYSTEMFEKDTEYWQQEVTNYWKMLGNKIKPDTIRNVMDMKANLGSFAAALKDKDVWVMNVVPENGANTLKIIYDRGLLGTVHNWCEAFSTYPRTYDLLHAWTIFSDIIEKECSPEDLLIEMDRILRPKGFIIVHDKRLVVLSIKKFLPALHWVAVVTSNVEQDSNQGKDDAVLIIQKKMWLTSESIRISE* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0323 595 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 405 540 IPR029063 -
Gso10g0323 595 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 71 582 IPR004159 GO:0008168
Gso10g0323 595 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 338 IPR029063 -
Gso10g0323 595 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 9 593 IPR004159 GO:0008168
Gso10g0323 595 PANTHER METHYLTRANSFERASE PMT1-RELATED 9 593 - -
Gso10g0323 595 Gene3D Vaccinia Virus protein VP39 188 330 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0323 Gso-Chr10 3475886 3480550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0323 - - gmx:100784179 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g0323 10 3475886 3480550 Gso19g1376 19 42599195 42604494 PCT
Gso10g0323 10 3475886 3480550 Gso3g1381 3 39788532 39793716 PCT