Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1376 ATGTTTTTCATGGCAAGCATGGCAAGAGGAAGAGCAGATGTGAACTCCAGAAAAAAATTGGTCACAGCTGTGTTGGTTTTGGTGATTGTTGGTGGTTTTTTCTATTTCTATTCTCAGAATAGTGATTCATCTTCTGTTGTGTATGGTGATAAATCTTTGAGCCACTTTGGTTTGGGAGGGGACAAAGATGATGGTGAATCTTCCTCCACAGTTGTTGGAGGAGAGGGCAGTGTTGTACCAAAGAGCATTCCAGTCTGTGATGATCGATTATCCGAGCTGATTCCTTGTCTGGACAGAAATCTCATATACCAAACAAGATTGAAGCTTGATTTATCTTTGATGGAGCACTATGAGAGACACTGCCCAACACCTGATAGGAGATACAATTGTTTAATTCCTCCTCCTCCAGGGTACAAGGTTCCTATCAAGTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAATATACCTCATACCCATCTAGCAACTGAAAAATCTGACCAGAACTGGATGGTTGTGAAAGGTGAAACAATAGTGTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGGTAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCAAACAATGATATAAACAATGGGGGAAGAGTCAGGTCTGTTCTTGATGTTGGCTGTGGGGTTGCTAGCTTTGGAGGATATCTTATTTCCTCTAATGTGATAGCAATGTCATTGGCACCAAATGATGTTCATCAAAATCAAATCCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTGGGGACCCAAAGACTCCCTTATCCAAGTAGATCATTCGAACTTGCTCATTGCTCTCGCTGTAGAATCGATTGGCTTCAGAGAGATGGTATACTTCTGCTTGAGCTGGATAGGTTACTGAGGCCAGGAGGTTATTTCGCGTACTCATCTCCTGAAGCCTATGCACAGGATGAAGAGGATAGGAGGATATGGCGAGAAATGAGCACTCTTGTGGAGAGGATGTGCTGGAAAATAGCTTCTAAGAAGGATCAGACTGTTATTTGGGTCAAGCCTCTCACTAATAGCTGCTACTTAAAGAGATTGCCTGGTACTAAGCCTCCACTCTGCAGGTCTGATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGTTTGCATCTCACGTTATTCAGATCAAATGCACAAAGCAAAAGGAAGTGATTTGGCTCCTTGGCCTGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTACTGAAATGTTTGAGAAGGACATGGAAGTTTGGAAACAACGAGTTCGTAATTACTGGAGCAAGCTAGCCAGTAAGATTAAGCCAGACACAATTCGGAACGTGATGGATATGAAGGCAAACTTGGGTTCATTTGCAGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTAGTGCCAGAAAATGAACAAAAAACTCTCAAGATTATATACGACAGAGGACTTATAGGAACAGTTCACAACTGGTGTGAAGCTTTTTCAACCTACCCTCGAACGTATGATCTACTCCATGCATGGACTGTGTTTTCTGATATTATTAAGAAAGAATGCAGTCCAGAGGATTTATTAATTGAGATGGATAGAATCCTAAGGCCAAAGGGTTTCATCATTGTCCATGATAAGCGTTCAGTGGTGGAGTATATAAAGAAATACTTGCCAGCATTACACTGGGAGGCTGTGACCATATATGATGTAGATGATGATGATACAGTGATTATAATTCAAAAGAAAATGTGGCTCACAAGTCAAAGCATCAAGGTCTCTGAATAG 1833 0.4179 MFFMASMARGRADVNSRKKLVTAVLVLVIVGGFFYFYSQNSDSSSVVYGDKSLSHFGLGGDKDDGESSSTVVGGEGSVVPKSIPVCDDRLSELIPCLDRNLIYQTRLKLDLSLMEHYERHCPTPDRRYNCLIPPPPGYKVPIKWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGETIVFPGGGTHFHYGAGKYIASIANMLNFPNNDINNGGRVRSVLDVGCGVASFGGYLISSNVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTQRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSTLVERMCWKIASKKDQTVIWVKPLTNSCYLKRLPGTKPPLCRSDDDPDAVWGVKMKVCISRYSDQMHKAKGSDLAPWPARLTTPPPRLAEIHYSTEMFEKDMEVWKQRVRNYWSKLASKIKPDTIRNVMDMKANLGSFAAALKDKDVWVMNVVPENEQKTLKIIYDRGLIGTVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSPEDLLIEMDRILRPKGFIIVHDKRSVVEYIKKYLPALHWEAVTIYDVDDDDTVIIIQKKMWLTSQSIKVSE* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1376 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 355 IPR029063 -
Gso19g1376 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 418 585 IPR029063 -
Gso19g1376 610 Gene3D Vaccinia Virus protein VP39 423 588 IPR029063 -
Gso19g1376 610 Gene3D Vaccinia Virus protein VP39 208 353 IPR029063 -
Gso19g1376 610 PANTHER METHYLTRANSFERASE PMT1-RELATED 12 608 - -
Gso19g1376 610 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 12 608 IPR004159 GO:0008168
Gso19g1376 610 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 92 595 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1376 Gso-Chr19 42599195 42604494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1376 - - gmx:100805403 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1376 19 42599195 42604494 Gso3g1381 3 39788532 39793716 GST
Gso19g1376 19 42599195 42604494 Gso10g0054 10 620731 627474 PCT
Gso10g0323 10 3475886 3480550 Gso19g1376 19 42599195 42604494 PCT