Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1323 ATGAGGAGTTTCTTCCCTGCTGAATCCTGTAAAGAGGCTCACCCAAATGCTTTGAATCCTCAGTCATGGCTTCAAATTGAAAGAGGGAAACTTCCCAAGTTGTCATCATCATCACACCCCTCATCTGCCTCAATGTGTTGTTTTTTTTTTGTGGGGTTGGGGTGTGGTGTTTGTTTTGCTGTCATCTGCTTTAGTGAATCTCTGATCAAGGTCCCACAGCCAGCTATACTGCCTTTCTTTAAGCCTGTTGATTATGTGGAGGTTTTAGCTCAAATCCATGAAGAACTTGAGTCTTGTCCTCCGCAGGAGAGGTCAAACTTGTTTTTGTTGCAATACCAGGTCTTCAGGGGCCTTGGGGAAGTTAAACTGATGCGTAGAAGCCTCCAGGGAGCATGGCAGAGAGCCCACACTGTTCATGAGAAGATTATATTTGGGGCATGGTTGAAATATGAGAAGCAAGAGGAAGAGCTAATAGCTGACTTGCTTGCAGCTTGTGGTAAATGTGCGAAGGAGTTTGCGCCTGTAGATATAGCGTCTCTTCTTCCATTTGATGTAAATGCAGGTTCCGAGGGGAGAACGACCAATGAGAACTGCATTTCTCAAAATGTTACTTTTACGATTGGAAGTGAAAAGATAATTTGTGAGAGACAAAAAATTTCGGAACTTTCGGCACCATTTCGTGCAATGCTCAAGGGGCATTTCAGTGAATCACTCTCCGAGACTATAGATTTGTCTGAAAATAATATCTCCCCCTCAGGTATGAAGGCAATAAGTGATTTCAGTTTGAATGGCAGTTTAATTGAGGTCCTTCCAAATCTTTTGTTGGAGATATTAGTTTTCGCAAACAAGTATTGTTGTGAAAGACTTAAAGATGCTTGCGATAGAAGACTTGCATCCTTAGTTTCCTCCAAAGAAGATGCTGTGGAGCTCATGGAATATGCTCTTGATGAGCATTCAACTGTCCTTGCTGCATCTTGTTTACAAGTCCTTTTGCGTGATCTTCCAAACTGTTTGAATGACAATCGGGTGGTGGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGCAGTCATGGTTGGGCCAGGTATATTTGCACTTTTCTGTTTCTTAGGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATATCCTGGAACGGTTAGTTGAGTTTGCTGAGAATGACCAGCAGAGACTACTCGCTTTACATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAGTATGATGAAGCACGTTGTCTTTTTGAAGGGGCTGTAAATGCAGGCCATATATATTCTGTGGCAGGTTTAGCTAGACTGGACTATATAAAGGGTGACAAGCTTTTATCTTATGGGCAGCTCAACTCAGTCATTTCATCTGTTACTCCACTTGGATGGATGTATCAGGAAAGATCACTATACTGTGACGGTGACAAAAGGTGGGAGGACCTTGAGAAAGCAAGTAATCTGGATCCTACTCTTATATATCCTTACACATACAGGGCTGCCTCTTTAATGAGAACTCAGAATGCTCAAGCTGCACTAGCAGAAATCAATCGGATTCTTGGGTTCAAACTTTCACCAGAATGTTTGGAAGTACGATTTTTTATCCACCTTTCTCTTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACAATTCTTACTTTGCGTTCAGATTATAGAATGTTTGAGGGGCGTGTTGCTGCATCCCAACTCTGTACTCTTGTGCGTGAGCATGTTGAGCGTTGGACAACTGCAGATTGTTGGGCACGGTTATATGATTGTTGGTCTGCAGTTGATGATATTGGATCTCTATCTGTTATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTATTCTATACTTCAGACAGTCATTGCTTCTCCTAAGGTTGAACTGTCCTGAGGCTGCTATGCGGAGTTTACAGTTAGCTCGGCAACATGCATCAAGTGAGCATGAACGTCTTGTATATGAGGGGTGGATCTTATATGATACAGGTCATTATGAGGAAGGGCTCTGGAAAGCTGAAGAGTCTATCAATATCAAAAGATCTTTTGAGGCCTTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTATAGATCCATCATGTTCACCAACTGTTATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTTAACAATCTTGGAAGTGTTTATGTTGACTGTGGTAAATTGGACTTGGCCGCTGATTGTTATATCAATGCCCTTAAAATCCGACACACCCGAGCTCATCATGGTCTTGCTCGCGTTCATTGTCTAAAAAATGATAAGGCTGCTGCGTATATGGAAATGACCGAACTTATTAAGAAGGCAAAAAACAATGCCTCTGCTTATGAGAAGAGGTCTGAGTACTGTGATCGTGAACAAGCAAAGGAAGATCTGGAGATGGTCACTAGATTAGATCCACTTCGGGTCTATCCTTATAGATATCGTGCTGCAGTATTGATGGACGACCACAAGGAAGAGGAAGCCATTGCAGAACTCTCTAGAGCTATTGCATTTAAAGCTGATTTGCATCTCTTGCATCTACGTGCAGCATTCCATGAACATAAAGAGGATGTCTTAGGTGCTCTAAGAGACTGTCGTGCTGCCCTCTCAGTGGACCCGAACCACCAAGAAATGTTGGAACTTCATAGCCGAGTCAATAGACACGAGCCATGA 2727 0.425 MRSFFPAESCKEAHPNALNPQSWLQIERGKLPKLSSSSHPSSASMCCFFFVGLGCGVCFAVICFSESLIKVPQPAILPFFKPVDYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQRAHTVHEKIIFGAWLKYEKQEEELIADLLAACGKCAKEFAPVDIASLLPFDVNAGSEGRTTNENCISQNVTFTIGSEKIICERQKISELSAPFRAMLKGHFSESLSETIDLSENNISPSGMKAISDFSLNGSLIEVLPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDAVELMEYALDEHSTVLAASCLQVLLRDLPNCLNDNRVVEIFVHANKQQLAVMVGPGIFALFCFLGEVSMNLNSSSDTTAHILERLVEFAENDQQRLLALHQLGCVRLLRKEYDEARCLFEGAVNAGHIYSVAGLARLDYIKGDKLLSYGQLNSVISSVTPLGWMYQERSLYCDGDKRWEDLEKASNLDPTLIYPYTYRAASLMRTQNAQAALAEINRILGFKLSPECLEVRFFIHLSLEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRLNCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHYEEGLWKAEESINIKRSFEAFFLKAYALADSSIDPSCSPTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKEDLEMVTRLDPLRVYPYRYRAAVLMDDHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHQEMLELHSRVNRHEP* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1323 908 SUPERFAMILY TPR-like 397 565 IPR011990 GO:0005515
Gso3g1323 908 SUPERFAMILY TPR-like 616 760 IPR011990 GO:0005515
Gso3g1323 908 SMART tpr_5 731 764 IPR019734 GO:0005515
Gso3g1323 908 SMART tpr_5 623 656 IPR019734 GO:0005515
Gso3g1323 908 SMART tpr_5 860 893 IPR019734 GO:0005515
Gso3g1323 908 PANTHER ETO1-LIKE PROTEIN 1 1 908 - -
Gso3g1323 908 PANTHER ETO1-RELATED 1 908 IPR044631 GO:0010105
Gso3g1323 908 Coils Coil 783 803 - -
Gso3g1323 908 Gene3D Tetratricopeptide repeat domain 807 906 IPR011990 GO:0005515
Gso3g1323 908 SUPERFAMILY TPR-like 714 899 IPR011990 GO:0005515
Gso3g1323 908 SUPERFAMILY POZ domain 201 297 IPR011333 -
Gso3g1323 908 Gene3D Potassium Channel Kv1.1; Chain A 195 341 IPR011333 -
Gso3g1323 908 Gene3D Tetratricopeptide repeat domain 619 806 IPR011990 GO:0005515
Gso3g1323 908 ProSiteProfiles TPR repeat profile. 731 764 IPR019734 GO:0005515
Gso3g1323 908 Gene3D Tetratricopeptide repeat domain 370 568 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1323 Gso-Chr3 39112329 39119218 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1323 - - gmx:100806268 1744.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1323 19 41931547 41938484 Gso3g1323 3 39112329 39119218 GST
Gso3g1323 3 39112329 39119218 Gso2g1196 2 14932295 14937356 PCT
Gso3g1323 3 39112329 39119218 Gso10g0256 10 2645394 2650093 PCT
Gso2g1196 2 14932295 14937356 Gso3g1323 3 39112329 39119218 PCT
Gso10g0256 10 2645394 2650093 Gso3g1323 3 39112329 39119218 PCT