Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1196 ATGAGGACTTTCTTCACTGCAGAATCATGTAAAGAAACACAGCCTAATGCTTTAAATCCACAGTCCTGGCTCCAGGTTGAAAGAGGGAAGCTTCCCAAATTGTCATCACAGTCCTCTTCTGCATCAATAGAATCTCTAATCAAGGTCCCACAGTCACCTATACTCCCGTTCTTCAAACCTGTTGATTATGTGGAAGTTTTAGCTCAAATCCATGAAGAACTTGAGTCATGTCCTCCTCAGGAAAAGTCAAATCTGTTTTTGTTACAATACCAGGTCTTTAAGGGCCTGGGGGATGTCAAACTAATGCGTAGAAGCCTCCGGTCAGCTTGGCAGAGAGCAAACACTGTTCATGAGAAAATTATATTTGGGGCATGGCTGAAGTATGAGAAGCAAGAAGAATTAGTTGCTCAGTTGCTCACAGCTTGTGGTAAATGTGAAAAGGAATTTGGACCCATAGATGTAGAATCTCAGATTCCTTTTGATGAGAATGTAAGATCCCAGGATAGAGCTTCGATGAATGGGAACAATGCTTCAGAATATGTTATCTTTAAAATTGGAGATGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCATTTCATGCAATGCTAAAGGGGTGTTTCAGGGAATCACTTTCTGAGACTATAGATTTGTCTGAAAACAATCTCTCTCCTTCAGGTATGAGGGCAATAAGTTATTTTAGCTCGACAGGGAGTTTACTTGATGTCCCTCCGAATCTTTTGGTGGAAATATTAGCTTTTGCAAATAAGTATTGTTGCGAAAGACTAAAACAGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAAGATGCTCTGGAACTCATGGAATATGCTGTTGATCAGAATTCAGCTGGCCTTGCGGCTTCTTGTTTACAAGTTCTTTTACGTGATATTCCCAACTGCTTGAGCGACAATCAGGTTGTGGAATTATTTATTCATGCTAATAAGCAGCAGTTGGCAGTCATGGTTGGGCCTGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTAAATTCTAGTTCAGACACAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAAATGACAAGCAGAGACTGCTGGCATTTCATCAATTGGGATGTGTAAGACTCTCAAGGAAAGAATATGATGAAGCCTATTGTCTTTTTGAGAGGGCTTTAAATGTAGGTCATGTTTATTCTGTTGCGGGTTTAGCTAGACTGGACTCTATAAAGGGTGAGAAACTTTTATCTTATGAGAAGATCAGTTCAGTCATTTCTTCAGATACTCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGATGGTGATTTGAGGCAGAAAGACCTTGAGAAAGCAACTGAACTGGATCCTACTCTTATATATCCCTATATGTATAGGACTGCCTCTTTAATGAAGACAGGGAATGTTCAAGGTGCACTGGCTGAAATCAACCGGATTCTTGGCTTTAAACTTTCGTTAGAGTGCTTGGAATTACGGTTTTTTATCTATCTGGCCCTTGAGGACTACAAAGCAGCAGTCCGAGATGTTCAAGCAATTCTTACCCTGTGTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAACAGCAGATTGTTGGGCCCGATTATATGACTGTTGGTCTGCTGTTGATGATATTGAGTCTCTTTCTGTCATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGTTAAACTGTCCTGAGGCTGCCATGCGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAAAGACTTGTATATGAGGGGTGGATCTTGTATGATACGGGTCATTGTGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTATTAGTATTAAAAGGTCTTTTGAGGCCTACTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTGTAGATTCATCATGTTCTTCAACTGTTATTTCTCTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGCAAAGGTCAGGCCCTAAACAATCTTGGAAGTGTTTATGTTGATTGTGGGAAATTGGACTTAGCAGAAGATTGCTATATAAAGGCTCTTAAAATCCAGCACACCCGAGCGCATCAGGGTCTTGCTCGTGTTCATTTTCTCAAAAATGATAAGGCTGCTGCTTACAAAGAAATGACCAATCTTATTGAGAAGGCGAGAAACAATGCATCAGCATATGAGAAGAGGTCTGAGTATGGTGATCGTGATCTCACGAAGGCAGATTTGGAGATGGTGACTAGATTGGATCCACTTCGGGTGTATCCTTATAGATATCGCGCAGCAGTTTTGATGGACAATCATAAGGAAGAGGAAGCCATTGCGGAACTCTCTAGAGCAATTGCATTTAAAGCTGATTTGCACCTCCTGCATCTACGTGCAGCATTCCATGAACACAATGGAGATGTCTTAGGTGCGCTAAGAGACTGTCGTGCTGCGCTCTCAGTGGATCCAAACCACCAAAAAATGTTGGAACTTCATTGTCGTGTTAATAGTCACGAGCCATGA 2661 0.416 MRTFFTAESCKETQPNALNPQSWLQVERGKLPKLSSQSSSASIESLIKVPQSPILPFFKPVDYVEVLAQIHEELESCPPQEKSNLFLLQYQVFKGLGDVKLMRRSLRSAWQRANTVHEKIIFGAWLKYEKQEELVAQLLTACGKCEKEFGPIDVESQIPFDENVRSQDRASMNGNNASEYVIFKIGDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENNLSPSGMRAISYFSSTGSLLDVPPNLLVEILAFANKYCCERLKQACDRRLASLVSSREDALELMEYAVDQNSAGLAASCLQVLLRDIPNCLSDNQVVELFIHANKQQLAVMVGPGIFALFCFLSEVSMNLNSSSDTTAHFLERLVDFAENDKQRLLAFHQLGCVRLSRKEYDEAYCLFERALNVGHVYSVAGLARLDSIKGEKLLSYEKISSVISSDTPLGWMYQERSLYCDGDLRQKDLEKATELDPTLIYPYMYRTASLMKTGNVQGALAEINRILGFKLSLECLELRFFIYLALEDYKAAVRDVQAILTLCPSYKMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDIESLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHASSEHERLVYEGWILYDTGHCEEGLQKAEESISIKRSFEAYFLKAYALADSSVDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVYVDCGKLDLAEDCYIKALKIQHTRAHQGLARVHFLKNDKAAAYKEMTNLIEKARNNASAYEKRSEYGDRDLTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHNGDVLGALRDCRAALSVDPNHQKMLELHCRVNSHEP* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1196 886 Gene3D Tetratricopeptide repeat domain 360 546 IPR011990 GO:0005515
Gso2g1196 886 ProSiteProfiles TPR repeat profile. 709 742 IPR019734 GO:0005515
Gso2g1196 886 PANTHER ETO1-RELATED 1 886 IPR044631 GO:0010105
Gso2g1196 886 PANTHER ETO1-LIKE PROTEIN 1 1 886 - -
Gso2g1196 886 SUPERFAMILY TPR-like 381 738 IPR011990 GO:0005515
Gso2g1196 886 SMART BTB_4 179 279 IPR000210 GO:0005515
Gso2g1196 886 Gene3D Potassium Channel Kv1.1; Chain A 171 319 IPR011333 -
Gso2g1196 886 Gene3D Tetratricopeptide repeat domain 782 884 IPR011990 GO:0005515
Gso2g1196 886 SUPERFAMILY POZ domain 181 275 IPR011333 -
Gso2g1196 886 Coils Coil 754 781 - -
Gso2g1196 886 Pfam Tetratricopeptide repeat 710 738 IPR019734 GO:0005515
Gso2g1196 886 Gene3D Tetratricopeptide repeat domain 596 771 IPR011990 GO:0005515
Gso2g1196 886 SUPERFAMILY TPR-like 693 879 IPR011990 GO:0005515
Gso2g1196 886 SMART tpr_5 838 871 IPR019734 GO:0005515
Gso2g1196 886 SMART tpr_5 709 742 IPR019734 GO:0005515
Gso2g1196 886 SMART tpr_5 509 542 IPR019734 GO:0005515
Gso2g1196 886 SMART tpr_5 380 413 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1196 Gso-Chr2 14932295 14937356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1196 - - gmx:100785039 1735.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1196 2 14932295 14937356 Gso10g0256 10 2645394 2650093 GST
Gso19g1323 19 41931547 41938484 Gso2g1196 2 14932295 14937356 PCT
Gso3g1323 3 39112329 39119218 Gso2g1196 2 14932295 14937356 PCT
Gso2g1196 2 14932295 14937356 Gso19g1323 19 41931547 41938484 PCT
Gso2g1196 2 14932295 14937356 Gso3g1323 3 39112329 39119218 PCT